Evidence map›Paper›PMID 30101403›Full record

ArticleWorld journal of microbiology & biotechnology2018

Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.

Kiran Nawaz, Ahmad Ali Shahid, Louis Bengyella, Muhammad Nasir Subhani, Muhammad Ali, Waheed Anwar, Sehrish Iftikhar, Shinawar Waseem Ali

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Kiran NawazInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan. kirannawaz34@gmail.com.
Ahmad Ali ShahidInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
Louis BengyellaTree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee, USA. bengyellalouis@gmail.com.
Muhammad Nasir SubhaniInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
Muhammad AliInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
Waheed AnwarInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
Sehrish IftikharInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
Shinawar Waseem AliInstitute of Agricultural Science, University of the Punjab, Lahore, Pakistan.
University of the Punjab · PKCentre of Excellence in Molecular Biology · PKWashington State University · US

Funding

Higher Education Commission of Pakistan 112-34924-2AV1-197
6 · The paper itself

Abstract

Chili pepper (Capsicum annum L.) is an important economic crop that is severely destroyed by the filamentous oomycete Phytophthora capsici. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of P. capsici strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of P. capsici isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of P. capsici that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current P. capsici management strategies.

Indexed as

Genetic VariationAcrylamidesAlanineCapsicumCluster AnalysisDNA, RibosomalDrug ResistanceEvolution, MolecularFungicides, IndustrialGenes, Mating Type, FungalMorpholinesPakistanPeptide Chain Elongation, TranslationalPhenotypePhylogenyPhytophthoraAcrylamidesAlanineazoxystrobindimethomorphDNA, RibosomalFungicides, IndustrialmefenoxamMorpholinesPyrimidinespyrimorphStrobilurinsTubulinFungicide resistanceOomycetesPathogenicity testPhylogenyRoot-rotβ-Tubulin

Identifiers

PMID30101403
OpenAlexW2887198065

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.