Evidence map›Paper›PMID 30101286›Full record

ArticleFEMS microbiology ecology2018

Tracing back multidrug-resistant bacteria in fresh herb production: from chive to source through the irrigation water chain.

Maria-Theresia Gekenidis, Ulrich Schöner, Ueli von Ah, Mathias Schmelcher, Fiona Walsh, David Drissner

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. A novel phage encoding host defense modulators demonstrates in-vivo therapeutic efficacy against carbapenem-resistant E. coli ST1432.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
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  2. Correlation ofApplied and environmental microbiology · 2025
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  9. Extended-Spectrum Beta-Lactamase Producing-Frontiers in microbiology · 2021
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  10. Long-Term Persistence ofMicroorganisms · 2020
    Article
  11. Article
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  14. Article
  15. Whole Genome Sequencing ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Maria-Theresia GekenidisMicrobiology of Plant Foods, Agroscope, Müller-Thurgau-Strasse 29, 8820 Waedenswil, Switzerland.
Ulrich SchönerMäder Kräuter AG, Buchserstrasse 2, 8113 Boppelsen, Switzerland.
Ueli von AhBiotechnology, Agroscope, Schwarzenburgstrasse 161, 3003 Bern, Switzerland.
Mathias SchmelcherInstitute of Food, Nutrition and Health, ETH Zurich, Schmelzbergstrasse 7, 8092 Zurich, Switzerland.
Fiona WalshDepartment of Biology, Maynooth University, W23F2H6 Maynooth, County Kildare, Ireland.
David DrissnerMicrobiology of Plant Foods, Agroscope, Müller-Thurgau-Strasse 29, 8820 Waedenswil, Switzerland.
Agroscope · CHETH Zurich · CHNational University of Ireland, Maynooth · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Environmental antibiotic-resistant bacteria (ARB) can be transferred to humans through foods. Fresh produce in particular is an ideal vector due to frequent raw consumption. A major contamination source of fresh produce is irrigation water. We hypothesized that water quality significantly affects loads of ARB and their diversity on fresh produce despite various other contamination sources present under agricultural practice conditions. Chive irrigated from an open-top reservoir or sterile-filtered water (control) was examined. Heterotrophic plate counts (HPC) and ARB were determined for water and chive with emphasis on Escherichia coli and Enterococcus spp. High HPC of freshly planted chive decreased over time and were significantly lower on control- vs. reservoir-irrigated chive at harvest (1.3 log (CFU/g) lower). Ciprofloxacin- and ceftazidime-resistant bacteria were significantly lower on control-irrigated chive at harvest and end of shelf life (up to 1.8 log (CFU/g) lower). Escherichia coli and Enterococcus spp. repeatedly isolated from water and chive proved resistant to up to six or four antibiotic classes (80% or 49% multidrug-resistant, respectively). Microbial source tracking identified E. coli-ST1056 along the irrigation chain and on chive. Whole-genome sequencing revealed that E. coli-ST1056 from both environments were clonal and carried the same transmissible multidrug-resistance plasmid, proving water as source of chive contamination. These findings emphasize the urgent need for guidelines concerning ARB in irrigation water and development of affordable water disinfection technologies to diminish ARB on irrigated produce.

Indexed as

Agricultural IrrigationDrug Resistance, Multiple, BacterialWater MicrobiologyBacteriaChiveEnterococcusEscherichia coliWater Quality

Identifiers

PMID30101286
PMCPMC6138756
OpenAlexW2887782376

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.