Evidence map›Paper›PMID 30100648›Full record

ArticleJournal of the American Statistical Association2017

Promoting Similarity of Sparsity Structures in Integrative Analysis with Penalization.

Yuan Huang, Qingzhao Zhang, Sanguo Zhang, Jian Huang, Shuangge Ma

Abstract read
In one paragraph

Article in Journal of the American Statistical Association, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Regression Trees With Fused Leaves.Statistics in medicine · 2024
    Article
  4. Article
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  6. Joint and Individual Component Regression.Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Modeling Pregnancy Outcomes through Sequentially Nested Regression Models.Journal of the American Statistical Association · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Structured Analysis of the High-dimensional FMR Model.Computational statistics & data analysis · 2020
    Article
  17. Article
  18. GRIA: Graphical Regularization for Integrative Analysis.Proceedings of the ... SIAM International Conference on Data Mining. SIAM International Conference on Data Mining · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yuan HuangPostdoctoral associate, Department of Biostatistics, Yale University (New Haven, CT 06520).
Qingzhao ZhangPostdoctoral associate at the Department of Biostatistics, Yale University (New Haven, CT 06520).
Sanguo ZhangProfessor at the School of Mathematical Science, University of Chinese Academy of Sciences (Beijing, China).
Jian HuangProfessor at the Department of Statistics and Actuarial Science, University of Iowa (Iowa City, IA 52242).
Shuangge MaAssociate professor, VA Cooperative Studies Program Coordinating Center (West Haven, CT 06516).

Funding

Yale Pathology Tissue Services Shared ResourceP30CA016359 · NCI · YALE UNIVERSITY · PI DAVID L RIMM · 1985 to 2026
$85.0M
Novel Methods for Integrative Analysis of Cancer Genomic DataR01CA142774 · NCI · YALE UNIVERSITY · PI MA, SHUANGGE · 2010 to 2013
$1.3M
NCI NIH HHS P30 CA016359NCI NIH HHS R01 CA142774
6 · The paper itself

Abstract

For data with high-dimensional covariates but small sample sizes, the analysis of single datasets often generates unsatisfactory results. The integrative analysis of multiple independent datasets provides an effective way of pooling information and outperforms single-dataset and several alternative multi-datasets methods. Under many scenarios, multiple datasets are expected to share common important covariates, that is, the corresponding models have similarity in their sparsity structures. However, the existing methods do not have a mechanism to promote the similarity in sparsity structures in integrative analysis. In this study, we consider penalized variable selection and estimation in integrative analysis. We develop an

Indexed as

cancer genomic dataintegrative analysisL0 penalizationsparsity structurevariable selection

Identifiers

PMID30100648
PMCPMC6086364

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.