Evidence map›Paper›PMID 30098729›Full record

ArticleBiophysical journal2018

The Unfolded State of the C-Terminal Domain of L9 Expands at Low but Not at Elevated Temperatures.

Natalie E Stenzoski, Bowu Luan, Alex S Holehouse, Daniel P Raleigh

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Natalie E StenzoskiGraduate Program in Biochemistry & Structural Biology, Stony Brook, New York.
Bowu LuanDepartment of Chemistry, Stony Brook University, Stony Brook, New York.
Alex S HolehouseCenter for Biological Systems Engineering, Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, Missouri.
Daniel P RaleighGraduate Program in Biochemistry & Structural Biology, Stony Brook, New York; Department of Chemistry, Stony Brook University, Stony Brook, New York; Institute of Structural and Molecular Biology, University of College London, London, United Kingdom. Electronic address: daniel.raleigh@stonybrook.edu.
Institute of Structural and Molecular Biology · GBStony Brook School · USStony Brook University · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The temperature dependence of the overall dimensions of the denatured state ensemble (DSE) of proteins remains unclear. Some studies indicate compaction of the DSE at high temperatures, whereas others argue that dimensions do not decrease. The degree of compaction or expansion in the cold-denatured state has been less studied. To investigate the temperature dependence of unfolded state dimensions, small angle x-ray scattering measurements were performed in native buffer in the absence of denaturant for a designed point mutant of the C-terminal domain of L9, a small cooperatively folded α-β protein, at 14 different temperatures over the range of 5-60°C. The I98A mutation destabilizes the domain such that both the DSE and the folded state are populated at 25°C in the absence of denaturant or extreme pH. Thermal unfolding as well as cold unfolding can thus be observed in the absence of denaturant, allowing a direct comparison of these regimes for the same protein using the same technique. The temperature of maximal stability, T

Indexed as

Protein DenaturationTemperatureAmino Acid SequenceModels, MolecularMutationProtein Conformation, alpha-HelicalProtein DomainsRibosomal Proteinsribosomal protein L9Ribosomal Proteins

Identifiers

PMID30098729
PMCPMC6104559
OpenAlexW2884854600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.