Evidence map›Paper›PMID 30097956›Full record

ReviewInternational journal of computer assisted radiology and surgery2018

Using the variogram for vector outlier screening: application to feature-based image registration.

Jie Luo, Sarah Frisken, Ines Machado, Miaomiao Zhang, Steve Pieper, Polina Golland, Matthew Toews, Prashin Unadkat, Alireza Sedghi, Haoyin Zhou and 6 more

Abstract readReview
In one paragraph

Review in International journal of computer assisted radiology and surgery, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Reference-free Bayesian model for pointing errors of typein neurosurgical planning.International journal of computer assisted radiology and surgery · 2023
    Article
  5. Article
  6. Article
  7. Registration of vascular structures using a hybrid mixture model.International journal of computer assisted radiology and surgery · 2019
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Jie LuoBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA. jluo5@bwh.harvard.edu.
Sarah FriskenBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Ines MachadoBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Miaomiao ZhangComputer Science and Engineering Department, Lehigh University, 19 Memorial Drive West, Bethlehem, PA, 18015, USA.
Steve PieperBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Polina GollandComputer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, MA, 02139, USA.
Matthew ToewsEcole de Technologie Superieure, 1100 Rue Notre-Dame Ouest, Montreal, H3C 1K3, Canada.
Prashin UnadkatBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Alireza SedghiBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Haoyin ZhouBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Alireza MehrtashBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Frank PreiswerkBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Cheng-Chieh ChengBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Alexandra GolbyBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.
Masashi SugiyamaGraduate School of Frontier Sciences, The University of Tokyo, 5 Chome-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan.
William M WellsBrigham and Women's Hospital, Harvard Medical School, 75 Francis St, Boston, MA, 02115, USA.

Funding

Training and DisseminationP41EB015902 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI PUJOL, SONIA · 2012 to 2022
$20.9M
Image Guided Therapy Center - Ultrasound-based sensor system for the monitoring of COVID-19 patientsP41EB015898 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI TEMPANY, CLARE M · 2012 to 2021
$18.9M
National Institutes of Health P41-EB015898-09National Institutes of Health P41-EB015902NIBIB NIH HHS P41 EB015898NIBIB NIH HHS P41 EB015902
6 · The paper itself

Abstract

purposeMatching points that are derived from features or landmarks in image data is a key step in some medical imaging applications. Since most robust point matching algorithms claim to be able to deal with outliers, users may place high confidence in the matching result and use it without further examination. However, for tasks such as feature-based registration in image-guided neurosurgery, even a few mismatches, in the form of invalid displacement vectors, could cause serious consequences. As a result, having an effective tool by which operators can manually screen all matches for outliers could substantially benefit the outcome of those applications.

methodsWe introduce a novel variogram-based outlier screening method for vectors. The variogram is a powerful geostatistical tool for characterizing the spatial dependence of stochastic processes. Since the spatial correlation of invalid displacement vectors, which are considered as vector outliers, tends to behave differently than normal displacement vectors, they can be efficiently identified on the variogram.

resultsWe validate the proposed method on 9 sets of clinically acquired ultrasound data. In the experiment, potential outliers are flagged on the variogram by one operator and further evaluated by 8 experienced medical imaging researchers. The matching quality of those potential outliers is approximately 1.5 lower, on a scale from 1 (bad) to 5 (good), than valid displacement vectors.

conclusionThe variogram is a simple yet informative tool. While being used extensively in geostatistical analysis, it has not received enough attention in the medical imaging field. We believe there is a good deal of potential for clinically applying the proposed outlier screening method. By way of this paper, we also expect researchers to find variogram useful in other medical applications that involve motion vectors analyses.

Indexed as

AlgorithmsImage Interpretation, Computer-AssistedHumansNeurosurgical ProceduresSurgery, Computer-AssistedFeature-based registrationNeurosurgeryVariogramVector outlier screening

Identifiers

PMID30097956
PMCPMC6224309

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.