Evidence map›Paper›PMID 30097005›Full record

ArticleBMC genetics2018

High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females.

Md Tarikul Islam, Suprovath Kumar Sarker, Shezote Talukder, Golam Sarower Bhuyan, Asifuzzaman Rahat, Nafisa Nawal Islam, Hasan Mahmud, Mohammad Amir Hossain, A K M Muraduzzaman, Jakia Rahman and 14 more

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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  9. Cell and Gene Therapy for Anemia: Hematopoietic Stem Cells and Gene Editing.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 3 countries.

Md Tarikul IslamLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Suprovath Kumar SarkerLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Shezote TalukderLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Golam Sarower BhuyanInfectious Diseases Laboratory, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Asifuzzaman RahatInfectious Diseases Laboratory, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Nafisa Nawal IslamLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Hasan MahmudLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Mohammad Amir HossainInfectious Diseases Laboratory, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
A K M MuraduzzamanDepartment of Virology, Institute of Epidemiology, Disease Control and Research, Mohakhali, Dhaka, Bangladesh.
Jakia RahmanInfectious Diseases Laboratory, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Syeda Kashfi QadriDepartment of Paediatric Medicine, KK Women's and Children's Hospital, Singapore, Singapore.
Mohammod ShahidullahDepartment of Neonatology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Mohammad Abdul MannanDepartment of Neonatology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Sarabon TahuraDepartment of Paediatric hematology and oncology, Dhaka Shishu Hospital, Dhaka, Bangladesh.
Manzoor HussainDepartment of Paediatric Medicine and Cardiology, Dhaka Shishu Hospital, Dhaka, Bangladesh.
Narayan SahaDepartment of Paediatric Neurology, National Institute of Neurosciences & Hospital, Dhaka, Bangladesh.
Shahida AkhterDepartment of Paediatrics, Bangladesh Institute of Research & Rehabilitation in Diabetes, Endocrine and Metabolic Disorders, Shahbag, Dhaka, Bangladesh.
Nazmun NaharDepartment of Paediatrics, Bangladesh Institute of Research & Rehabilitation in Diabetes, Endocrine and Metabolic Disorders, Shahbag, Dhaka, Bangladesh.
Firoza BegumDepartment of Obstetrics and Gynecology, Bangabandhu Sheikh Mujib Medical University, Dhaka, Bangladesh.
Tahmina ShirinDepartment of Virology, Institute of Epidemiology, Disease Control and Research, Mohakhali, Dhaka, Bangladesh.
Sharif AkhteruzzamanDepartment of Genetic Engineering & Biotechnology, University of Dhaka, Dhaka, Bangladesh.
Syed Saleheen QadriLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Firdausi QadriLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh.
Kaiissar MannoorLaboratory of Genetics and Genomics, Institute for Developing Science and Health Initiatives, Mohakhali, Dhaka, Bangladesh. kaiissar@ideshi.org.ORCID 0000-0002-2394-0447
Bangladesh Institute of Development Studies · BDBangladesh Medical University · BDBangladesh Institute of Research and Rehabilitation for Diabetes Endocrine and Metabolic Disorders · BDBangladesh Shishu (Children) Hospital & Institute · BDInstitute of Epidemiology, Disease Control and Research · BDNational Institute of Neurosciences & Hospital · BDUniversity of Dhaka · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLike glucose-6-phosphate dehydrogenase (G6PD) deficient hemizygous males and homozygous females, heterozygous females could also manifest hemolytic crisis, neonatal hyperbilirubinemia or kernicterus upon exposure to oxidative stress induced by certain foods such as fava beans, drugs or infections. Although hemizygous males and homozygous females are easily detected by conventional G6PD enzyme assay method, the heterozygous state could be missed by the conventional methods as the mosaic population of both normal and deficient RBCs circulates in the blood. Thus the present study aimed to apply high resolution melting (HRM) curve analysis approach to see whether HRM could be used as a supplemental approach to increase the chance of detection of G6PD heterozygosity.

resultsSixty-three clinically suspected females were evaluated for G6PD status using both enzyme assay and HRM analysis. Four out of sixty-three participants came out as G6PD deficient by the enzyme assay method, whereas HRM approach could identify nine participants with G6PD variants, one homozygous and eight heterozygous. Although only three out of eight heterozygous samples had G6PD enzyme deficiency, the HRM-based heterozygous G6PD variants detection for the rest of the samples with normal G6PD enzyme activities could have significance because their newborns might fall victim to serious consequences under certain oxidative stress.

conclusionsIn addition to the G6PD enzyme assay, HRM curve analysis could be useful as a supplemental approach for detection of G6PD heterozygosity.

Indexed as

HeterozygoteMutationAdolescentChildChild, PreschoolDNA Mutational AnalysisFemaleGlucosephosphate DehydrogenaseGlucosephosphate Dehydrogenase DeficiencyHumansInfantInfant, NewbornNucleic Acid DenaturationGlucosephosphate DehydrogenaseG6PD heterozygosityGlucose-6-phosphate dehydrogenase deficiencyHeterozygous G6PD variantsHigh resolution melting curve analysis

Identifiers

PMID30097005
PMCPMC6086071
OpenAlexW2887520747

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.