Evidence map›Paper›PMID 30096172›Full record

ArticlePloS one2018

LSD1 mediated changes in the local redox environment during the DNA damage response.

Michelle L Duquette, Justine Kim, Linda Z Shi, Michael W Berns

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Chemical biology approaches to uncovering nuclear ROS control.Current opinion in chemical biology · 2023
    Review
  5. Article
  6. Article
  7. Review
  8. A single cell death is disruptive to spontaneous CaFrontiers in cellular neuroscience · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Calcium Dynamics in Astrocytes During Cell Injury.Frontiers in bioengineering and biotechnology · 2020
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Michelle L DuquetteInstitute of Engineering in Medicine, University of California, San Diego, CA, United States of America.ORCID 0000-0002-4241-8187
Justine KimInstitute of Engineering in Medicine, University of California, San Diego, CA, United States of America.
Linda Z ShiInstitute of Engineering in Medicine, University of California, San Diego, CA, United States of America.
Michael W BernsInstitute of Engineering in Medicine, University of California, San Diego, CA, United States of America.
University of California San Diego · USUniversity of California, Irvine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The redox state of the cell can be affected by many cellular conditions. In this study we show that detectable reactive oxygen species (ROS) are also generated in response to DNA damage by the chromatin remodeling factor and monoamine oxidase LSD1/KDM1A. This raised the possibility that the localized generation of hydrogen peroxide produced by LSD1 may affect the function of proximally located DNA repair proteins. The two major pathways for repair of DNA double-strand breaks (DSBs) are homologous recombination (HR) and non-homologous end joining (NHEJ). Cells were exposed to low levels of ectopic H2O2, DNA breaks generated by laser light, and recruitment kinetics of NHEJ protein Ku80 to DNA damage sites determined. Ku80 recruitment to damage sites was significantly decreased in cells pretreated with H2O2 while HR end binding protein Nbs1 was increased. This suggests that the DNA repair pathway choice has the potential to be modulated by the local redox state. This has implications for chemotherapeutic approaches involving generating DNA damage to target actively dividing cancer cells, which may be more or less effective dependent on the redox state of the targeted cells and the predominant repair pathway required to repair the type of DNA damage generated.

Indexed as

DNA Breaks, Double-StrandedCell Cycle ProteinsCell Line, TumorChromatin Assembly and DisassemblyHistone DemethylasesHumansHydrogen PeroxideKu AutoantigenLasersMonoamine OxidaseMonoamine Oxidase InhibitorsNuclear ProteinsOxidation-ReductionReactive Oxygen SpeciesCell Cycle ProteinsHistone DemethylasesHydrogen PeroxideKDM1A protein, humanKu AutoantigenMonoamine OxidaseMonoamine Oxidase InhibitorsNBN protein, humanNuclear ProteinsReactive Oxygen Species

Identifiers

PMID30096172
PMCPMC6086436
OpenAlexW2885608760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.