Evidence map›Paper›PMID 30094615›Full record

ArticleMicrobial ecology2019

Tissue Microbiome of Norway Spruce Affected by Heterobasidion-Induced Wood Decay.

Fei Ren, Andriy Kovalchuk, Mukrimin Mukrimin, Mengxia Liu, Zhen Zeng, Rajendra P Ghimire, Minna Kivimäenpää, Jarmo K Holopainen, Hui Sun, Fred O Asiegbu

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Interkingdom and intrakingdom interactions in the microbiome ofApplied and environmental microbiology · 2023
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  9. Bacteria Community InhabitingFrontiers in microbiology · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Bacterial Community Structure ofMicroorganisms · 2020
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Fei RenFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
Andriy KovalchukFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
Mukrimin MukriminFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
Mengxia LiuFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
Zhen ZengFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland.
Rajendra P GhimireDepartment of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 1627, FIN-70211, Kuopio, Finland.
Minna KivimäenpääDepartment of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 1627, FIN-70211, Kuopio, Finland.
Jarmo K HolopainenDepartment of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 1627, FIN-70211, Kuopio, Finland.
Hui SunCollaborative Innovation Center of Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing, China. hui.sun@njfu.edu.cn.
Fred O AsiegbuFaculty of Agriculture and Forestry, Department of Forest Sciences, University of Helsinki, P.O. Box 27, FIN-00014, Helsinki, Finland. fred.asiegbu@helsinki.fi.
University of Helsinki · FIUniversity of Eastern Finland · FIExperimental Center of Forestry in North China · CNNanjing Forestry University · CN

Funding

Academy of Finland 276862Academy of Finland 278424Jiangsu Specially-Appointed Professor, China 165010015
6 · The paper itself

Abstract

Plants live in close association with microbial symbionts, which may affect the host fitness, productivity, and tolerance against biotic and abiotic stressors. The composition of plant microbial communities is influenced by many biotic and abiotic factors, but little is known about the effect of plant pathogens on the structure of these communities. In this study, we investigated the structure of bacterial communities associated with different tissues of asymptomatic and symptomatic (Heterobasidion-rotten) Norway spruce (Picea abies (L.) Karst.) trees. Our results demonstrated that each of the investigated anatomic tissues (root, bark, down stem, upper stem, and needles) harbored a unique bacterial assemblage. However, the health status of the host trees had little effect on the structure of bacterial communities, as the only significant differences among asymptomatic and symptomatic trees were found in the composition of the bacterial communities of needles. Proteobacteria was predominant in all anatomic regions with the highest abundance in needles (86.7%), whereas Actinobacteria showed an opposite trend, being more abundant in the woody tissues than in needles. Additionally, we performed profiling of terpenoid compounds present in spruce xylem and phloem. Total concentrations of monoterpenes and sesquiterpenes were considerably higher in asymptomatic trees. However, we found no significant correlations between terpenoid profiles of spruce trees and the composition of their bacterial communities. Our results provide an insight into the diversity of bacteria associated with Norway spruce tree tissues. At the same time, the health status and terpenoid content of host trees had a limited effect on the composition of bacterial communities in our survey.

Indexed as

MicrobiotaBacteriaBasidiomycotaMonoterpenesNorwayPiceaPlant DiseasesWoodMonoterpenesBacterial biotaHeterobasidionHost-microbe interactionsMicrobial communityMicrobiomeNorway spruceTerpenoids

Identifiers

PMID30094615
OpenAlexW2887708747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.