Evidence map›Paper›PMID 30094457›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2018

Novel gene Sen2 conferring broad-spectrum resistance to Synchytrium endobioticum mapped to potato chromosome XI.

Jarosław Plich, Jarosław Przetakiewicz, Jadwiga Śliwka, Bogdan Flis, Iwona Wasilewicz-Flis, Ewa Zimnoch-Guzowska

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. A Hitchhiker's guide to the potato wart disease resistance galaxy.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jarosław PlichPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland. j.plich@ihar.edu.pl.ORCID http://orcid.org/0000-0002-2931-0147
Jarosław PrzetakiewiczPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), 05-870, Radzików, Błonie, Poland.
Jadwiga ŚliwkaPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.ORCID http://orcid.org/0000-0001-5381-6693
Bogdan FlisPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.
Iwona Wasilewicz-FlisPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.
Ewa Zimnoch-GuzowskaPlant Breeding and Acclimatization Institute - National Research Institute (IHAR-PIB), Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.ORCID http://orcid.org/0000-0002-1994-8665
Plant Breeding and Acclimatization Institute - National Research Institute · PL

Funding

Narodowe Centrum Nauki 2013/11/B/NZ9/01959
6 · The paper itself

Abstract

Key message Sen2 gene for potato wart resistance, located on chromosome XI in a locus distinct from Sen1 , provides resistance against eight wart pathotypes, including the virulent ones important in Europe. Synchytrium endobioticum causes potato wart disease imposing severe losses in potato production, and as a quarantine pathogen in many countries, it results in lost trade markets and land for potato cultivation. The resistance to S. endobioticum pathotype 1(D1) is widespread in potato cultivars but new virulent pathotypes appear and the problem re-emerges. To characterize and map a new gene for resistance to potato wart, we used diploid F1 potato population from a cross of potato clone resistant to S. endobioticum pathotype 1(D1) and virulent pathotypes: 2(G1), 6(O1), 8(F1), 18(T1), 2(Ch1), 3(M1) and 39(P1) with a potato clone resistant to pathotype 1(D1) only. The 176 progeny clones were tested for resistance to eight wart pathotypes with a modified Glynne-Lemmerzahl method. Bimodal distributions and co-segregation of resistance in the population show that a single resistance gene, Sen2, underlies the resistance to eight pathotypes. Resistance to pathotype 1(D1) was additionally conferred by the locus Sen1 inherited from both parents. Sen2 was mapped to chromosome XI using DArTseq markers. The genetic and physical distances between Sen1 and Sen2 loci were indirectly estimated at 63 cM and 32 Mbp, respectively. We developed PCR markers co-segregating with the Sen2 locus that can be applied in marker-assisted selection of potatoes resistant to eight important pathotypes of S. endobioticum. Wide spectrum of the Sen2 resistance may be an indication of durability which can be enhanced by the pyramiding of the Sen2 and Sen1 loci as in 61 clones selected within this study.

Indexed as

Genes, PlantChytridiomycotaDisease ResistanceGenetic MarkersPhenotypePlant DiseasesSolanum tuberosumGenetic Markers

Identifiers

PMID30094457
PMCPMC6208938
OpenAlexW2886079168

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.