Evidence map›Paper›PMID 30093669›Full record

ArticleNature communications2018

Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment.

Camilo E Quevedo, Abimael Cruz-Migoni, Nicolas Bery, Ami Miller, Tomoyuki Tanaka, Donna Petch, Carole J R Bataille, Lydia Y W Lee, Phillip S Fallon, Hanna Tulmin and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 130 citations in OpenAlex.

  1. Article
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  6. Journal of the American Chemical Society · 2025
    Article
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  8. Article
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  13. Multiplexed imaging for probing RAS-RAF interactions in living cells.Biochimica et biophysica acta. Biomembranes · 2023
    Article
  14. Review
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  16. Review
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  19. Article
  20. Evolution of nanobodies specific for BCL11A.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Camilo E QuevedoWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Abimael Cruz-MigoniWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.ORCID http://orcid.org/0000-0001-5937-4101
Nicolas BeryWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Ami MillerWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Tomoyuki TanakaLeeds Institute for Molecular Medicine, St James University Hospital, Leeds, LS9 7TF, UK.
Donna PetchLeeds Institute for Molecular Medicine, St James University Hospital, Leeds, LS9 7TF, UK.
Carole J R BatailleChemistry Research Laboratory, 12 Mansfield Rd, Oxford, OX1 3TA, UK.
Lydia Y W LeeDomainex, Chesterford Research Park, Little Chesterford, Saffron Walden, CB10 1XL, UK.
Phillip S FallonDomainex, Chesterford Research Park, Little Chesterford, Saffron Walden, CB10 1XL, UK.
Hanna TulminWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Matthias T EhebauerWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Narcis Fernandez-FuentesResearch Complex at Harwell, Rutherford Appleton Laboratory, Didcot, Oxon, OX11 0FA, UK.ORCID http://orcid.org/0000-0002-6421-1080
Angela J RussellChemistry Research Laboratory, 12 Mansfield Rd, Oxford, OX1 3TA, UK.
Stephen B CarrResearch Complex at Harwell, Rutherford Appleton Laboratory, Didcot, Oxon, OX11 0FA, UK.
Simon E V PhillipsResearch Complex at Harwell, Rutherford Appleton Laboratory, Didcot, Oxon, OX11 0FA, UK.ORCID http://orcid.org/0000-0001-8922-0250
Terence H RabbittsWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK. terence.rabbitts@imm.ox.ac.uk.
John Radcliffe Hospital · GBRutherford Appleton Laboratory · GBDomainex (United Kingdom) · GBOxford Research Group · GBSt James's University Hospital · GBCentre for Human Genetics · GB

Funding

Medical Research Council MR/J000612/1Medical Research Council (MRC) MR/J000612/1Wellcome TrustWellcome Trust 100842/Z/12/Z
6 · The paper itself

Abstract

Targeting specific protein-protein interactions (PPIs) is an attractive concept for drug development, but hard to implement since intracellular antibodies do not penetrate cells and most small-molecule drugs are considered unsuitable for PPI inhibition. A potential solution to these problems is to select intracellular antibody fragments to block PPIs, use these antibody fragments for target validation in disease models and finally derive small molecules overlapping the antibody-binding site. Here, we explore this strategy using an anti-mutant RAS antibody fragment as a competitor in a small-molecule library screen for identifying RAS-binding compounds. The initial hits are optimized by structure-based design, resulting in potent RAS-binding compounds that interact with RAS inside the cells, prevent RAS-effector interactions and inhibit endogenous RAS-dependent signalling. Our results may aid RAS-dependent cancer drug development and demonstrate a general concept for developing small compounds to replace intracellular antibody fragments, enabling rational drug development to target validated PPIs.

Indexed as

Binding Sites, AntibodySignal TransductionAntibodiesBiomarkersCell Line, TumorCell SurvivalCrystallography, X-RayHEK293 CellsHumansImmunoglobulin FragmentsMutationProtein BindingProtein Domainsras ProteinsRecombinant ProteinsSmall Molecule LibrariesAntibodiesBiomarkersImmunoglobulin Fragmentsras ProteinsRecombinant ProteinsSmall Molecule Libraries

Identifiers

PMID30093669
PMCPMC6085350
OpenAlexW2886738135

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.