Evidence map›Paper›PMID 30093493›Full record

ArticleThe Journal of cell biology2018

VPS13A and VPS13C are lipid transport proteins differentially localized at ER contact sites.

Nikit Kumar, Marianna Leonzino, William Hancock-Cerutti, Florian A Horenkamp, PeiQi Li, Joshua A Lees, Heather Wheeler, Karin M Reinisch, Pietro De Camilli

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 356 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
356citing papers in PubMed, 2 pooled it
29.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

356 citing papers in PubMed, 2 syntheses or guidelines pooled it, 594 citations in OpenAlex.

  1. Stay in touch with the endoplasmic reticulum.Science China. Life sciences · 2024
    Pooled it
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  14. Heterogeneity, dynamics and organelle interactions of lipid droplets.Nature reviews. Molecular cell biology · 2026
    Review
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296 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nikit KumarDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.ORCID 0000-0003-3673-2302
Marianna LeonzinoDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.
William Hancock-CeruttiDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.
Florian A HorenkampDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.
PeiQi LiDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.
Joshua A LeesDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.ORCID 0000-0001-7421-6881
Heather WheelerDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT.
Karin M ReinischDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT karin.reinisch@yale.edu.ORCID 0000-0001-9140-6150
Pietro De CamilliDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT pietro.decamilli@yale.edu.ORCID 0000-0001-9045-0723
Yale University · USHoward Hughes Medical Institute · US

Funding

Yale Diabetes Research CenterP30DK045735 · NIDDK · YALE UNIVERSITY · PI Kevan C Herold, GERALD I SHULMAN · 1993 to 2026
$44.0M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI ANGUS C. NAIRN, Kenneth Robert WILLIAMS · 2004 to 2026
$37.1M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
Molecular Basis for Membrane Lipid HomeostasisR35GM131715 · NIGMS · YALE UNIVERSITY · PI KARIN M REINISCH · 2019 to 2026
$6.5M
MOLECULAR MECHANISMS IN SYNAPTIC VESICLE RECYCLINGR01NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 1997 to 2021
$4.7M
Regulatory Mechanisms in Membrane TraffickingR01GM080616 · NIGMS · YALE UNIVERSITY · PI REINISCH, KARIN M · 2007 to 2018
$4.1M
TRAINING GRANT IN TRAUMA, BURN AND WOUND HEALING RESEARCT32GM008616 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BUCHMAN, STEVEN R, CHUNG, KEVIN C · 1997 to 2025
$3.1M
Molecular Mechanisms in Synaptic Vesicle RecyclingR37NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 2010 to 2016
$2.7M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Investigating the lipid transport properties of VPS13C at membrane contact sites in relation to Parkinsons Disease pathogenesisF31NS110229 · NINDS · YALE UNIVERSITY · PI HANCOCK-CERUTTI, WILLIAM FRANKLIN · 2018 to 2020
$60k
NCRR NIH HHS S10 RR029205NIDA NIH HHS P30 DA018343NIDDK NIH HHS P30 DK045735NIGMS NIH HHS P41 GM103403NIGMS NIH HHS R01 GM080616NIGMS NIH HHS R35 GM131715NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32 GM008283NIGMS NIH HHS T32 GM008616NINDS NIH HHS F31 NS110229NINDS NIH HHS R01 NS036251NINDS NIH HHS R37 NS036251
6 · The paper itself

Abstract

Mutations in the human VPS13 genes are responsible for neurodevelopmental and neurodegenerative disorders including chorea acanthocytosis (VPS13A) and Parkinson's disease (VPS13C). The mechanisms of these diseases are unknown. Genetic studies in yeast hinted that Vps13 may have a role in lipid exchange between organelles. In this study, we show that the N-terminal portion of VPS13 is tubular, with a hydrophobic cavity that can solubilize and transport glycerolipids between membranes. We also show that human VPS13A and VPS13C bind to the ER, tethering it to mitochondria (VPS13A), to late endosome/lysosomes (VPS13C), and to lipid droplets (both VPS13A and VPS13C). These findings identify VPS13 as a lipid transporter between the ER and other organelles, implicating defects in membrane lipid homeostasis in neurological disorders resulting from their mutations. Sequence and secondary structure similarity between the N-terminal portions of Vps13 and other proteins such as the autophagy protein ATG2 suggest lipid transport roles for these proteins as well.

Indexed as

AnimalsAutophagy-Related ProteinsChlorocebus aethiopsCOS CellsEndoplasmic ReticulumEndosomesHeLa CellsHumansLipid DropletsLysosomesMitochondriaProtein DomainsProteinsProtein Structure, SecondarySaccharomyces cerevisiaeVesicular Transport ProteinsATG2B protein, humanAutophagy-Related ProteinsProteinsVesicular Transport ProteinsVPS13A protein, humanVPS13C protein, human

Identifiers

PMID30093493
PMCPMC6168267
OpenAlexW2885910759

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.