Evidence map›Paper›PMID 30089774›Full record

ArticleNature communications2018

Hypermethylation of gene body CpG islands predicts high dosage of functional oncogenes in liver cancer.

Maria Arechederra, Fabrice Daian, Annie Yim, Sehrish K Bazai, Sylvie Richelme, Rosanna Dono, Andrew J Saurin, Bianca H Habermann, Flavio Maina

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 128 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed, 1 pooled it
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 1 synthesis or guideline pooled it, 226 citations in OpenAlex.

  1. Pooled it
  2. Article
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  5. Review
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  7. Article
  8. Cell-Free DNA Hypermethylation in Patients with Acute Pancreatitis.International journal of molecular sciences · 2025
    Article
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  10. Article
  11. Review
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  15. BRAFiScience · 2025
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Maria ArechederraAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.
Fabrice DaianAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.ORCID http://orcid.org/0000-0001-6036-1906
Annie YimComputational Biology Group, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany.
Sehrish K BazaiAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.
Sylvie RichelmeAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.
Rosanna DonoAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.
Andrew J SaurinAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.ORCID http://orcid.org/0000-0001-5162-003X
Bianca H HabermannAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France.ORCID http://orcid.org/0000-0002-2457-7504
Flavio MainaAix Marseille Univ, CNRS, Developmental Biology Institute of Marseille (IBDM), Parc Scientifique de Luminy, Aix Marseille Univ, 13009, Marseille, France. flavio.maina@univ-amu.fr.ORCID http://orcid.org/0000-0001-6100-4695
Centre National de la Recherche Scientifique · FRMax Planck Institute of Biochemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic modifications such as aberrant DNA methylation reshape the gene expression repertoire in cancer. Here, we used a clinically relevant hepatocellular carcinoma (HCC) mouse model (Alb-R26

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticAnimalsCarcinogenesisCarcinoma, HepatocellularCell Line, TumorCpG IslandsDisease Models, AnimalEpigenesis, GeneticGene DosageHumansLiver NeoplasmsMiceMice, Inbred C57BLMice, TransgenicOncogenes

Identifiers

PMID30089774
PMCPMC6082886
OpenAlexW2887200576

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.