Evidence map›Paper›PMID 30088852›Full record

ArticleAmerican journal of medical genetics. Part A2018

A comprehensive clinical and genetic study in 127 patients with ID in Kinshasa, DR Congo.

Aimé Lumaka, Valerie Race, Hilde Peeters, Anniek Corveleyn, Zeynep Coban-Akdemir, Shalini N Jhangiani, Xiaofei Song, Gerrye Mubungu, Jennifer Posey, James R Lupski and 3 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in American journal of medical genetics. Part A, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Centers for Mendelian Genomics: A decade of facilitating gene discovery.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Aimé LumakaCentre for Human Genetics, Faculty of Medicine, University of Kinshasa, Kinshasa, DR, Congo.ORCID 0000-0002-5468-8678
Valerie RaceCentre for Human Genetics, University Hospital, University of Leuven, Leuven, Belgium.
Hilde PeetersCentre for Human Genetics, University Hospital, University of Leuven, Leuven, Belgium.
Anniek CorveleynCentre for Human Genetics, University Hospital, University of Leuven, Leuven, Belgium.
Zeynep Coban-AkdemirDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Shalini N JhangianiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Xiaofei SongDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Gerrye MubunguCentre for Human Genetics, Faculty of Medicine, University of Kinshasa, Kinshasa, DR, Congo.ORCID 0000-0002-8870-0575
Jennifer PoseyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas.
James R LupskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Joris R VermeeschCentre for Human Genetics, University Hospital, University of Leuven, Leuven, Belgium.
Prosper LukusaCentre for Human Genetics, Faculty of Medicine, University of Kinshasa, Kinshasa, DR, Congo.ORCID 0000-0002-5414-2915
Koenraad DevriendtCentre for Human Genetics, University Hospital, University of Leuven, Leuven, Belgium.
Baylor College of Medicine · USKU Leuven · BEUniversity of Liège · BEUniversity of Kinshasa · CD

Funding

Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
Individual genomic analyses to discover the molecular basis and mechanisms contributing to adult-onset diseaseK08HG008986 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI POSEY, JENNIFER ELLEN · 2017 to 2021
$831k
Flanders Research Fund (FWO) K210115Flanders Research Fund (FWO) V405213NNHGRI NIH HHS K08 HG008986NHGRI NIH HHS UM1 HG006542
6 · The paper itself

Abstract

Pathogenic variants account for 4 to 41% of patients with intellectual disability (ID) or developmental delay (DD). In Sub-Saharan Africa, the prevalence of ID is thought to be higher, but data in Central Africa are limited to some case reports. In addition, clinical descriptions of some syndromes are not available for this population. This study aimed at providing an estimate for the fraction of ID/DD for which an underlying etiological genetic cause may be elucidated and provide insights into their clinical presentation in special institutions in a Central African country. A total of 127 patients (33 females and 94 males, mean age 10.03 ± 4.68 years), were recruited from six institutions across Kinshasa. A clinical diagnosis was achieved in 44 but molecular confirmation was achieved in 21 of the 22 patients with expected genetic defect (95% clinical sensitivity). Identified diseases included Down syndrome (15%), submicroscopic copy number variants (9%), aminoacylase deficiency (0.8%), Partington syndrome in one patient (0.8%) and his similarly affected brother, X-linked syndromic Mental Retardation type 33 (0.8%), and two conditions without clear underlying molecular genetic etiologies (Oculo-Auriculo-Vertebral and Amniotic Bands Sequence). We have shown that genetic etiologies, similar to those reported in Caucasian subjects, are a common etiologic cause of ID in African patients from Africa. We have confirmed the diagnostic utility of clinical characterization prior to genetic testing. Finally, our clinical descriptions provide insights into the presentation of these genetic diseases in African patients.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAdolescentAdultAlgorithmsChildChild, PreschoolComparative Genomic HybridizationDemocratic Republic of the CongoDevelopmental DisabilitiesDisease ManagementExome SequencingFaciesFemaleGenetic MarkersGenetic TestingARX protein, humanGenetic MarkersHomeodomain ProteinsTranscription FactorsAfricaDown syndromeintellectual disabilityNGS in AfricaPartington syndromespecialized schoolsstriped micro-array

Identifiers

PMID30088852
PMCPMC6325645
OpenAlexW2887425415

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.