Evidence map›Paper›PMID 30087413›Full record

ArticleScientific reports2018

First evidence of the presence and activity of archaeal C3 group members in an Atlantic intertidal mudflat.

Céline Lavergne, Mylène Hugoni, Christine Dupuy, Hélène Agogué

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Céline LavergneUniversité de La Rochelle - CNRS, UMR 7266, LIENSs, 2 rue Olympe de Gouges, 17000, La Rochelle, France. celine.lavergne@pucv.cl.
Mylène HugoniUniversité Lyon 1 - UMR CNRS 5557/INRA 1418, Ecologie Microbienne, Villeurbanne, France.
Christine DupuyUniversité de La Rochelle - CNRS, UMR 7266, LIENSs, 2 rue Olympe de Gouges, 17000, La Rochelle, France.
Hélène AgoguéUniversité de La Rochelle - CNRS, UMR 7266, LIENSs, 2 rue Olympe de Gouges, 17000, La Rochelle, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phylogenetic assignment of archaeal communities is constantly evolving, and the recent discovery of new phyla that grouped into superphyla has provided novel insights into archaeal ecology and evolution in ecosystems. In intertidal sediments, archaea are known to be involved in key functional processes such as organic matter turnover, but the ecological relevance of the rarest archaeal groups is poorly investigated, due partly to the lack of cultivated members. The high resolution of microbial diversity provided by high-throughput sequencing technologies now allows the rare biosphere to be described. In this work, we focused on the archaeal C3 group, showing that this phylum is not only present (at the DNA level) independently of sediment depth but also active (at the RNA level) in specific sediment niches depending on vertical physicochemical gradients. Moreover, we highlight the ambiguous phylogenetic affiliation of this group, indicating the need of further research to get new insights into the role of the C3 group.

Indexed as

ArchaeaBiodiversityAtlantic OceanGeologic Sediments

Identifiers

PMID30087413
PMCPMC6081377

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.