Evidence map›Paper›PMID 30087361›Full record

ArticleScientific reports2018

Downstream Products are Potent Inhibitors of the Heparan Sulfate 2-O-Sulfotransferase.

David F Thieker, Yongmei Xu, Digantkumar Chapla, Chelsea Nora, Hong Qiu, Thomas Felix, Lianchun Wang, Kelley W Moremen, Jian Liu, Jeffrey D Esko and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

David F ThiekerDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-0786-8278
Yongmei XuDivision of Chemical Biology and Medicinal Chemistry, Eshelman School of Pharmacy, University of North Carolina, Rm 1044, Genetic Medicine Building, Chapel Hill, USA.
Digantkumar ChaplaComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Chelsea NoraDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, California, USA.
Hong QiuComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Thomas FelixDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA.
Lianchun WangDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-1454-2719
Kelley W MoremenDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-1768-582X
Jian LiuDivision of Chemical Biology and Medicinal Chemistry, Eshelman School of Pharmacy, University of North Carolina, Rm 1044, Genetic Medicine Building, Chapel Hill, USA.
Jeffrey D EskoDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, California, USA.ORCID http://orcid.org/0000-0001-8322-1834
Robert J WoodsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA. rwoods@ccrc.uga.edu.
University of Georgia · USUniversity of California San Diego · USUniversity of North Carolina at Chapel Hill · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
Recombinant Production of Glycosylation Enzymes for Biochem/Structural StudiesP01GM107012 · NIGMS · UNIVERSITY OF GEORGIA · PI PRESTEGARD, JAMES H. · 2013 to 2017
$7.5M
GENETIC CONTROL OF PROTEOGLYCAN METABOLISMR37GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 2000 to 2010
$3.9M
Robo4 and heparan sulfate proteoglycan in angiogenesisR01HL093339 · NHLBI · UNIVERSITY OF SOUTH FLORIDA · PI WANG, LIANCHUN · 2009 to 2018
$3.4M
LIPID METABOLISM IN ANIMAL CELLSR01GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 1985 to 2019
$3.4M
Heparan Sulfate in Prostate CancerU01CA225784 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI CAI, HOUJIAN, WANG, LIANCHUN · 2018 to 2023
$2.6M
Tools to enable non-specialists to model glycoconjugates and glycan-protein interactionsU01CA207824 · NCI · UNIVERSITY OF GEORGIA · PI FOLEY, B. LACHELE, WOODS, ROBERT J · 2016 to 2018
$1.7M
Using CRISPR-Cas9 technology to develop a mutant cell library for heparan sulfate structure-function studyR21HL131553 · NHLBI · UNIVERSITY OF GEORGIA · PI WANG, LIANCHUN · 2015 to 2016
$582k
NCI NIH HHS U01 CA207824NCI NIH HHS U01 CA225784NHLBI NIH HHS R01 HL093339NHLBI NIH HHS R21 HL131553NIGMS NIH HHS P01 GM107012NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM033063NIGMS NIH HHS R37 GM033063U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) CA207824U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM107012U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM33063
6 · The paper itself

Abstract

Heparan Sulfate (HS) is a cell signaling molecule linked to pathological processes ranging from cancer to viral entry, yet fundamental aspects of its biosynthesis remain incompletely understood. Here, the binding preferences of the uronyl 2-O-sulfotransferase (HS2ST) are examined with variably-sulfated hexasaccharides. Surprisingly, heavily sulfated oligosaccharides formed by later-acting sulfotransferases bind more tightly to HS2ST than those corresponding to its natural substrate or product. Inhibition assays also indicate that the IC

Indexed as

AnimalsBinding, CompetitiveBinding SitesCell LineCHO CellsCricetinaeCricetulusGlucosamineHeparan SulfateHumansMolecular Docking SimulationMutationOligosaccharidesSubstrate SpecificitySulfatesSulfotransferasesGlucosamineHeparan Sulfateheparan-sulfate 2-sulfotransferaseOligosaccharidesSulfatesSulfotransferases

Identifiers

PMID30087361
PMCPMC6081452
OpenAlexW2886656117

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.