Evidence map›Paper›PMID 30087354›Full record

ArticleNature communications2018

Structural basis of cell wall anchoring by SLH domains in Paenibacillus alvei.

Ryan J Blackler, Arturo López-Guzmán, Fiona F Hager, Bettina Janesch, Gudrun Martinz, Susannah M L Gagnon, Omid Haji-Ghassemi, Paul Kosma, Paul Messner, Christina Schäffer and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Article
  3. Cryo-EM structure and polar assembly of the PS2 S-layer ofProceedings of the National Academy of Sciences of the United States of America · 2025
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  13. A multidomain connector links the outer membrane and cell wall in phylogenetically deep-branching bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Review
  15. AssayingBiomolecules · 2021
    Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. TheMicroorganisms · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Ryan J BlacklerDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6, Canada.ORCID http://orcid.org/0000-0002-2795-8337
Arturo López-GuzmánDepartment of NanoBiotechnology, NanoGlycobiology Unit, Universität für Bodenkultur Wien, 1190, Vienna, Austria.
Fiona F HagerDepartment of NanoBiotechnology, NanoGlycobiology Unit, Universität für Bodenkultur Wien, 1190, Vienna, Austria.
Bettina JaneschDepartment of NanoBiotechnology, NanoGlycobiology Unit, Universität für Bodenkultur Wien, 1190, Vienna, Austria.
Gudrun MartinzDepartment of Chemistry, Universität für Bodenkultur Wien, 1190, Vienna, Austria.
Susannah M L GagnonDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6, Canada.
Omid Haji-GhassemiDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6, Canada.
Paul KosmaDepartment of Chemistry, Universität für Bodenkultur Wien, 1190, Vienna, Austria.ORCID http://orcid.org/0000-0001-5342-7161
Paul MessnerDepartment of NanoBiotechnology, NanoGlycobiology Unit, Universität für Bodenkultur Wien, 1190, Vienna, Austria.
Christina SchäfferDepartment of NanoBiotechnology, NanoGlycobiology Unit, Universität für Bodenkultur Wien, 1190, Vienna, Austria. christina.schaeffer@boku.ac.at.
Stephen V EvansDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6, Canada. svevans@uvic.ca.
BOKU University · ATUniversity of Victoria · CAUniversity of British Columbia · CAUniversity of Vienna · AT

Funding

Devices enabling improved light delivery for photodynamic therapy of oral cancerR41CA171356 · NCI · LUCIFICS, INC. · PI COTTRELL, WILLIAM J · 2012 to 2013
$179k
Austrian Science Fund FWF P 27374Austrian Science Fund FWF W 1224Austrian Science Fund (FWF Der Wissenschaftsfonds) P24305-B20Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada (Conseil de Recherches en Sciences Naturelles et en Génie du Canada) Discovery Grant 171356-2013
6 · The paper itself

Abstract

Self-assembling protein surface (S-) layers are common cell envelope structures of prokaryotes and have critical roles from structural maintenance to virulence. S-layers of Gram-positive bacteria are often attached through the interaction of S-layer homology (SLH) domain trimers with peptidoglycan-linked secondary cell wall polymers (SCWPs). Here we present an in-depth characterization of this interaction, with co-crystal structures of the three consecutive SLH domains from the Paenibacillus alvei S-layer protein SpaA with defined SCWP ligands. The most highly conserved SLH domain residue SLH-Gly29 is shown to enable a peptide backbone flip essential for SCWP binding in both biophysical and cellular experiments. Furthermore, we find that a significant domain movement mediates binding by two different sites in the SLH domain trimer, which may allow anchoring readjustment to relieve S-layer strain caused by cell growth and division.

Indexed as

Amino Acid MotifsBacillus anthracisCell ProliferationCell WallCircular DichroismCrystallizationLigandsMutagenesisMutagenesis, Site-DirectedPaenibacillusPeptidoglycanProtein BindingProtein DomainsRecombinant ProteinsLigandsPeptidoglycanRecombinant Proteins

Identifiers

PMID30087354
PMCPMC6081394
OpenAlexW2887380957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.