Evidence map›Paper›PMID 30086736›Full record

ArticleBMC systems biology2018

Statistical relationship between metabolic decomposition and chemical uptake predicts bioconcentration factor data for diverse chemical exposures.

Michael A Rowland, Hannah Wear, Karen H Watanabe, Kurt A Gust, Michael L Mayo

Abstract read
In one paragraph

Article in BMC systems biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Michael A RowlandEnvironmental Laboratory, US Army Engineer Research and Development Center, Vicksburg, MS, USA.
Hannah WearPortland State University, Portland, OR, USA.
Karen H WatanabeSchool of Mathematical and Natural Sciences, Arizona State University, Glendale, AZ, USA.
Kurt A GustEnvironmental Laboratory, US Army Engineer Research and Development Center, Vicksburg, MS, USA.
Michael L MayoEnvironmental Laboratory, US Army Engineer Research and Development Center, Vicksburg, MS, USA. Michael.L.Mayo@usace.army.mil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA challenge of in vitro to in vivo extrapolation (IVIVE) is to predict the physical state of organisms exposed to chemicals in the environment from in vitro exposure assay data. Although toxicokinetic modeling approaches promise to bridge in vitro screening data with in vivo effects, they are often encumbered by a need for redesign or re-parameterization when applied to different tissues or chemicals.

resultsWe demonstrate a parameterization of reverse toxicokinetic (rTK) models developed for the adult zebrafish (Danio rerio) based upon particle swarm optimizations (PSO) of the chemical uptake and degradation rates that predict bioconcentration factors (BCF) for a broad range of chemicals. PSO reveals a relationship between chemical uptake and decomposition parameter values that predicts chemical-specific BCF values with moderate statistical agreement to a limited yet diverse chemical dataset, and all without a need to retrain the model to new data.

conclusionsThe presented model requires only the octanol-water partitioning ratio to predict BCFs to a fidelity consistent with existing QSAR models. This success begs re-evaluation of the modeling assumptions; specifically, it suggests that chemical uptake into arterial blood may be limited by transport across gill membranes (diffusion) rather than by counter-current flow between gill lamellae (convection). Therefore, more detailed molecular modeling of aquatic respiration may further improve predictive accuracy of the rTK approach.

Indexed as

Models, BiologicalAnimalsBiological TransportToxicokineticsZebrafishBioconcentration factorsIVIVEPhysiologically based toxicokineticsReverse toxicokinetics

Identifiers

PMID30086736
PMCPMC6081876

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.