Evidence map›Paper›PMID 30086704›Full record

ArticleBMC medical genetics2018

Updated carrier rates for c.35delG (GJB2) associated with hearing loss in Russia and common c.35delG haplotypes in Siberia.

Marina V Zytsar, Nikolay A Barashkov, Marita S Bady-Khoo, Olga A Shubina-Olejnik, Nina G Danilenko, Alexander A Bondar, Igor V Morozov, Aisen V Solovyev, Valeriia Yu Danilchenko, Vladimir N Maximov and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. TheGenes · 2023
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  3. Review
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  11. Analysis of GJB2 Gene Mutations in 1330 Deafness Cases of Major Ethnic Groups in Northwest China.Inquiry : a journal of medical care organization, provision and financing
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Marina V ZytsarFederal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Nikolay A BarashkovYakut Scientific Centre of Complex Medical Problems, Yakutsk, Russia.
Marita S Bady-KhooScientific Research Institute of Medical-Social Problems and Management of the Republic of Tuva, Kyzyl, Russia.
Olga A Shubina-OlejnikInstitute of Genetics and Cytology, National Academy of Sciences, Minsk, Belarus.
Nina G DanilenkoInstitute of Genetics and Cytology, National Academy of Sciences, Minsk, Belarus.
Alexander A BondarInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russia.
Igor V MorozovNovosibirsk State University, Novosibirsk, Russia.
Aisen V SolovyevYakut Scientific Centre of Complex Medical Problems, Yakutsk, Russia.
Valeriia Yu DanilchenkoFederal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Vladimir N MaximovFederal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Olga L PosukhFederal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia. posukh@bionet.nsc.ru.ORCID 0000-0003-1352-3591
Novosibirsk State University · RUInstitute of Genetics and Cytology of the National Academy of Sciences of Belarus · BYNorth-Eastern Federal University · RUInstitute of Chemical Biology and Fundamental Medicine · RUInstitute of Cytology and Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMutations in GJB2 gene are a major causes of deafness and their spectrum and prevalence are specific for various populations. The well-known mutation c.35delG is more frequent in populations of Caucasian origin. Data on the c.35delG prevalence in Russia are mainly restricted to the European part of this country. We aimed to estimate the carrier frequency of c.35delG in Western Siberia and thereby update current data on the c.35delG prevalence in Russia. According to a generally accepted hypothesis, c.35delG originated from a common ancestor in the Middle East or the Mediterranean ~ 10,000-14,000 years ago and spread throughout Europe with Neolithic migrations. To test the c.35delG common origin hypothesis, we have reconstructed haplotypes bearing c.35delG and evaluated the approximate age of c.35delG in Siberia.

methodsThe carrier frequency of c.35delG was estimated in 122 unrelated hearing individuals living in Western Siberia. For reconstruction of haplotypes bearing c.35delG, polymorphic D13S141, D13S175, D13S1853 flanking the GJB2 gene, and intragenic rs3751385 were genotyped in deaf patients homozygous for c.35delG (n = 24) and in unrelated healthy individuals negative for c.35delG (n = 67) living in Siberia.

resultsWe present updated carrier rates for c.35delG in Russia complemented by new data on c.35delG carrier frequency in Russians living in Western Siberia (4.1%). Two common D13S141-c.35delG-D13S175-D13S1853 haplotypes, 126-c.35delG-105-202 and 124-c.35delG-105-202, were reconstructed in the c.35delG homozygotes from Siberia. Moreover, identical allelic composition of the two most frequent c.35delG haplotypes restricted by D13S141 and D13S175 was established in geographically remote regions: Siberia and Volga-Ural region (Russia) and Belarus (Eastern Europe).

conclusionsDistribution of the c.35delG carrier frequency in Russia is characterized by pronounced ethno-geographic specificity with a downward trend from west to east. Comparative analysis of the c.35delG haplotypes supports a common origin of c.35delG in some regions of Russia (Volga-Ural region and Siberia) and in Eastern Europe (Belarus). A rough estimation of the c.35delG age in Siberia (about 4800 to 8100 years ago) probably reflects the early formation stages of the modern European population (including the European part of the contemporary territory of Russia) since the settlement of Siberia by Russians started only at the end of sixteenth century.

Indexed as

AllelesConnexin 26ConnexinsDeafnessEuropeGene FrequencyGenotypeHaplotypesHearing LossHeterozygoteHomozygoteHumansMiddle EastMutationPolymorphism, Single NucleotideRussiaConnexin 26ConnexinsGJB2 protein, humanDeafnessGJB2, c.35delGHaplotypesSiberia

Identifiers

PMID30086704
PMCPMC6081885
OpenAlexW2887431544

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.