Evidence map›Paper›PMID 30084505›Full record

ArticleMagnetic resonance in medicine2019

Accelerating compressed sensing in parallel imaging reconstructions using an efficient circulant preconditioner for cartesian trajectories.

Kirsten Koolstra, Jeroen van Gemert, Peter Börnert, Andrew Webb, Rob Remis

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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  9. [Elimination of Gibbs artifact based on local subpixel shift and interlaced local variation].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2019
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Kirsten KoolstraC. J. Gorter Center for High Field MRI, Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0002-7873-1511
Jeroen van GemertCircuits & Systems Group, Electrical Engineering, Mathematics and Computer Science Faculty, Delft University of Technology, Delft, The Netherlands.
Peter BörnertC. J. Gorter Center for High Field MRI, Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands.
Andrew WebbC. J. Gorter Center for High Field MRI, Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands.
Rob RemisCircuits & Systems Group, Electrical Engineering, Mathematics and Computer Science Faculty, Delft University of Technology, Delft, The Netherlands.

Funding

Jeroen van Gemert receives funding from STW 13375Kirsten Koolstra receives funding from ERC Advanced 670629 NOMA MRI
6 · The paper itself

Abstract

purposeDesign of a preconditioner for fast and efficient parallel imaging (PI) and compressed sensing (CS) reconstructions for Cartesian trajectories. THEORY: PI and CS reconstructions become time consuming when the problem size or the number of coils is large, due to the large linear system of equations that has to be solved in

methodsIn this article we construct such a preconditioner by approximating the system matrix of the linear system, which comprises the data fidelity and includes total variation and wavelet regularization, by a matrix that is block circulant with circulant blocks. Due to this structure, the preconditioner can be constructed quickly and its inverse can be evaluated fast using only two fast Fourier transformations. We test the performance of the preconditioner for the conjugate gradient method as the linear solver, integrated into the well-established Split Bregman algorithm.

resultsThe designed circulant preconditioner reduces the number of iterations required in the conjugate gradient method by almost a factor of 5. The speed up results in a total acceleration factor of approximately 2.5 for the entire reconstruction algorithm when implemented in MATLAB, while the initialization time of the preconditioner is negligible.

conclusionThe proposed preconditioner reduces the reconstruction time for PI and CS in a Split Bregman implementation without compromising reconstruction stability and can easily handle large systems since it is Fourier-based, allowing for efficient computations.

Indexed as

Magnetic Resonance ImagingAlgorithmsBrainComputer SimulationData CompressionFourier AnalysisHumansImage Processing, Computer-AssistedLinear ModelsModels, TheoreticalSoftwareSpineWavelet Analysiscompressed sensingparallel imagingpreconditioningsplit bregman

Identifiers

PMID30084505
PMCPMC6283050

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.