Evidence map›Paper›PMID 30083958›Full record

ArticlePlant cell reports2018

Cyclopropane fatty acid biosynthesis in plants: phylogenetic and biochemical analysis of Litchi Kennedy pathway and acyl editing cycle genes.

Jay Shockey, David Kuhn, Tao Chen, Heping Cao, Barbara Freeman, Catherine Mason

Abstract read
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In one paragraph

Article in Plant cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jay ShockeyCommodity Utilization Research Unit, United States Department of Agriculture-Agricultural Research Service, Southern Regional Research Center, New Orleans, LA, 70124, USA. Jay.Shockey@ars.usda.gov.ORCID http://orcid.org/0000-0002-5057-5457
David KuhnSubtropical Horticulture Research Station, United States Department of Agriculture-Agricultural Research Service, Miami, FL, 33158, USA.
Tao ChenFairy Lake Botanical Garden, Chinese Academy of Sciences, Shenzhen, 518004, Guangdong, China.
Heping CaoCommodity Utilization Research Unit, United States Department of Agriculture-Agricultural Research Service, Southern Regional Research Center, New Orleans, LA, 70124, USA.
Barbara FreemanSubtropical Horticulture Research Station, United States Department of Agriculture-Agricultural Research Service, Miami, FL, 33158, USA.
Catherine MasonCommodity Utilization Research Unit, United States Department of Agriculture-Agricultural Research Service, Southern Regional Research Center, New Orleans, LA, 70124, USA.
Agricultural Research Service · USChinese Academy of Sciences · CN

Funding

Agricultural Research Service 6038-21000-024-00-DAgricultural Research Service 6435-41000-083-00D
6 · The paper itself

Abstract

key messageThis report describes the most extensive known gene discovery study from an oilseed that produces cyclopropane fatty acids, a novel industrial feedstock. Nature contains hundreds of examples of plant species that accumulate unusual fatty acids in seed triacylglycerols (TAG). Although lipid metabolic genes have been cloned from several exotic plant species, the underlying mechanisms that control the production of novel TAG species are still poorly understood. One such class of unusual fatty acids contain in-chain cyclopropane or cyclopropene functionalities that confer chemical and physical properties useful in the synthesis of lubricants, cosmetics, dyes, coatings, and other types of valuable industrial feedstocks. These cyclopropyl fatty acids, or CPFAs, are only produced by a small number of plants, primarily in the order Malvidae. Litchi chinensis is one member of this group; its seed oil contains at least 40 mol% CPFAs. Several genes, representing early, middle, and late steps in the Litchi fatty acid and TAG biosynthetic pathways have been cloned and characterized here. The tissue-specific and developmental transcript expression profiles and biochemical characteristics observed indicate which enzymes might play a larger role in Litchi seed TAG biosynthesis and accumulation. These data, therefore, provide insights into which genes likely represent the best targets for either silencing or overexpression, in future metabolic engineering strategies aimed at altering CPFA content.

Indexed as

CyclopropanesDiacylglycerol O-AcyltransferaseFatty AcidsFruitLipid MetabolismLitchiPlant ProteinsSeedsTranscriptomeTriglyceridescyclopropanecyclopropane fatty acidsCyclopropanescyclopropeneDiacylglycerol O-AcyltransferaseFatty AcidsPlant ProteinsTriglyceridesCyclopropane synthaseCyclopropyl fatty acidsDiacylglycerol acyltransferaseGene expressionTriacylglycerol

Identifiers

PMID30083958
OpenAlexW2885766194

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.