Evidence map›Paper›PMID 30083608›Full record

ArticleScience advances2018

BioBits™ Explorer: A modular synthetic biology education kit.

Ally Huang, Peter Q Nguyen, Jessica C Stark, Melissa K Takahashi, Nina Donghia, Tom Ferrante, Aaron J Dy, Karen J Hsu, Rachel S Dubner, Keith Pardee and 2 more

Abstract read
In one paragraph

Article in Science advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
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  7. One-pot cloning and protein expression platform for genetic engineering.bioRxiv : the preprint server for biology · 2025
    Article
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  20. Solid-Phase Cell-Free Protein Synthesis and Its Applications in Biotechnology.Advances in biochemical engineering/biotechnology · 2023
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Ally HuangDepartment of Biological Engineering, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0002-8711-8233
Peter Q NguyenWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.ORCID 0000-0002-0935-6404
Jessica C StarkDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0003-3828-5438
Melissa K TakahashiInstitute for Medical Engineering and Science, MIT, Cambridge, MA 02139, USA.ORCID 0000-0003-4937-2924
Nina DonghiaWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.ORCID 0000-0003-0826-904X
Tom FerranteWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.
Aaron J DyDepartment of Biological Engineering, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0003-0319-5416
Karen J HsuDepartment of Mechanical Engineering, Northwestern University, Evanston, IL 60208, USA.
Rachel S DubnerDepartment of Biological Sciences, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0003-3021-8222
Keith PardeeLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario M5S 3M2, Canada.ORCID 0000-0002-3812-8013
Michael C JewettDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0003-2948-6211
James J CollinsDepartment of Biological Engineering, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0002-5560-8246

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hands-on demonstrations greatly enhance the teaching of science, technology, engineering, and mathematics (STEM) concepts and foster engagement and exploration in the sciences. While numerous chemistry and physics classroom demonstrations exist, few biology demonstrations are practical and accessible due to the challenges and concerns of growing living cells in classrooms. We introduce BioBits™ Explorer, a synthetic biology educational kit based on shelf-stable, freeze-dried, cell-free (FD-CF) reactions, which are activated by simply adding water. The FD-CF reactions engage the senses of sight, smell, and touch with outputs that produce fluorescence, fragrances, and hydrogels, respectively. We introduce components that can teach tunable protein expression, enzymatic reactions, biomaterial formation, and biosensors using RNA switches, some of which represent original FD-CF outputs that expand the toolbox of cell-free synthetic biology. The BioBits™ Explorer kit enables hands-on demonstrations of cutting-edge science that are inexpensive and easy to use, circumventing many current barriers for implementing exploratory biology experiments in classrooms.

Indexed as

Cell Physiological PhenomenaBiosensing TechniquesEnzymesGreen Fluorescent ProteinsHydrogel, Polyethylene Glycol DimethacrylateMusaOdorantsSynthetic BiologyTeachingEnzymesGreen Fluorescent ProteinsHydrogel, Polyethylene Glycol Dimethacrylate

Identifiers

PMID30083608
PMCPMC6070312

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.