Evidence map›Paper›PMID 30083606›Full record

ArticleScience advances2018

CMPK2 and BCL-G are associated with type 1 interferon-induced HIV restriction in humans.

Ramy El-Diwany, Mary Soliman, Sho Sugawara, Florian Breitwieser, Alyza Skaist, Candelaria Coggiano, Neel Sangal, Michael Chattergoon, Justin R Bailey, Robert F Siliciano and 5 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. CMPK2 Promotes CD4Cell biochemistry and biophysics · 2024
    Article
  8. Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Ramy El-DiwanyDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-3224-6414
Mary SolimanDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0003-4765-4442
Sho SugawaraDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-5187-423X
Florian BreitwieserCenter for Computational Biology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-6192-0853
Alyza SkaistDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Candelaria CoggianoDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0003-3297-8057
Neel SangalDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Michael ChattergoonDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-2220-1116
Justin R BaileyDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Robert F SilicianoDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Joel N BlanksonDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-9683-8021
Stuart C RayDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-1051-7260
Sarah J WheelanDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0002-9002-0800
David L ThomasDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Ashwin BalagopalDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0002-6143-3104
Johns Hopkins University · USHoward Hughes Medical Institute · US

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI WILLIAM George NELSON · 1985 to 2026
$208.6M
Vaccine Response and Immunotherapeutics SWGP30AI094189 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Richard E. Chaisson · 2012 to 2026
$67.0M
Training Program in Cellular and Molecular MedicineT32GM008752 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI RAO, RAJINI · 2000 to 2019
$11.7M
The Progression of Hepatitis C Among IDUs with HIVR01DA016078 · NIDA · JOHNS HOPKINS UNIVERSITY · PI BALAGOPAL, ASHWIN, THOMAS, DAVID L · 2002 to 2016
$10.9M
Computational Methods for Genome Assembly, Transcript Assembly, and Variant DiscoveryR01HG006677 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SALZBERG, STEVEN L. · 2011 to 2025
$10.7M
The Impact of HCV Treatment in HIV/HCV coinfected and HCV monoinfected Incarcerated Persons on HCV EliminationR01DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI IRVIN, RISHA, THOMAS, DAVID L · 2000 to 2024
$8.7M
Spatial Models of Intrahepatic Hepatitis C Virus Propagation in HumansR01AI116868 · NIAID · TRIAD NATIONAL SECURITY, LLC · PI ASHWIN BALAGOPAL, Ruy M Ribeiro · 2016 to 2026
$8.5M
HIV HCV Coinfection Antiviral Therapy and FibrosisR37DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI THOMAS, DAVID L · 2010 to 2019
$7.0M
Institute for Clinical and Translational ResearchUL1TR000424 · NCATS · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2012 to 2012
$6.0M
Recognition of HIV by the Inflammasome Signaling ComplexK08AI102696 · NIAID · JOHNS HOPKINS UNIVERSITY · PI CHATTERGOON, MICHAEL ANAND · 2013 to 2017
$937k
NCATS NIH HHS UL1 TR000424NCI NIH HHS P30 CA006973NHGRI NIH HHS R01 HG006677NIAID NIH HHS K08 AI102696NIAID NIH HHS P30 AI094189NIAID NIH HHS R01 AI116868NIDA NIH HHS R01 DA013806NIDA NIH HHS R01 DA016078NIDA NIH HHS R37 DA013806NIGMS NIH HHS T32 GM008752
6 · The paper itself

Abstract

Type 1 interferons (IFN) are critical for host control of HIV and simian immunodeficiency virus. However, it is unknown which of the hundreds of interferon-stimulated genes (ISGs) restrict HIV in vivo. We sequenced RNA from cells that support HIV replication (activated CD4

Indexed as

Antiviral AgentsCD4-Positive T-LymphocytesGene Expression RegulationHIVHIV InfectionsHumansInterferon-alphaInterferon alpha-2Interferon Regulatory FactorsProspective StudiesProto-Oncogene Proteins c-bcl-2Virus ReplicationAntiviral AgentsBCL2L14 protein, humanInterferon-alphaInterferon alpha-2Interferon-alpha2bInterferon Regulatory FactorsProto-Oncogene Proteins c-bcl-2

Identifiers

PMID30083606
PMCPMC6070316
OpenAlexW2886755207

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.