Evidence map›Paper›PMID 30082751›Full record

ArticleInternational journal of obesity (2005)2019

FADS1 genotype is distinguished by human subcutaneous adipose tissue fatty acids, but not inflammatory gene expression.

Shannon L Klingel, Armand Valsesia, Arne Astrup, Marie Kunesova, Wim H M Saris, Dominique Langin, Nathalie Viguerie, David M Mutch

Abstract read
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In one paragraph

Article in International journal of obesity (2005), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Genetic regulation of fatty acid content in adipose tissue.American journal of human genetics · 2026
    Article
  2. Association ofWorld journal of gastroenterology · 2026
    Article
  3. Review
  4. Fatty acid desaturase genetic variations in heart failure and cardiovascular disease.American heart journal plus : cardiology research and practice · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Nutrigenomics of Dietary Lipids.Antioxidants (Basel, Switzerland) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 6 countries.

Shannon L KlingelDepartment of Human Health and Nutritional Sciences, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Armand ValsesiaNestlé Institute of Health Sciences, Department of Nutrition and Metabolic Health, Lausanne, Switzerland.
Arne AstrupDepartment of Nutrition, Exercise and Sports, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-8968-8996
Marie KunesovaInstitute of Endocrinology, Obesity Management Centre, Prague, Czech Republic.
Wim H M SarisDepartment of Human Biology, NUTRIM, School for Nutrition and Translational Research in Metabolism, Maastricht University Medical Centre, Maastricht, The Netherlands.
Dominique LanginInstitut National de la Santé et de la Recherche Médicale (Inserm), Institute of Metabolic and Cardiovascular Diseases, UMR1048, Toulouse, France.ORCID http://orcid.org/0000-0002-2669-7825
Nathalie ViguerieInstitut National de la Santé et de la Recherche Médicale (Inserm), Institute of Metabolic and Cardiovascular Diseases, UMR1048, Toulouse, France.
David M MutchDepartment of Human Health and Nutritional Sciences, University of Guelph, Guelph, ON, N1G 2W1, Canada. dmutch@uoguelph.ca.
Université Toulouse III - Paul Sabatier · FRUniversity of Guelph · CAInstitute of Endocrinology · CZMaastricht University Medical Centre · NLNestlé (Switzerland) · CHUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSingle nucleotide polymorphisms (SNPs) in FADS1/FADS2 genes are associated with changes in serum and tissue polyunsaturated fatty acid (PUFA) content. PUFA regulate inflammatory signaling pathways in adipose tissue; however, the effect of SNPs in FADS1/FADS2 on adipose tissue inflammation is equivocal. The present study examined if SNPs in FADS1/FADS2 modify human subcutaneous adipose tissue (SAT) fatty acid profiles and the expression of genes associated with inflammation/immune function, lipid metabolism, and cellular differentiation.

methodsSAT fatty acids and the expression of 117 genes were measured in 174 men and women from the DiOGenes Study using gas chromatography and qRT-PCR, respectively. Associations between fatty acids, gene expression, and SNPs in FADS1/FADS2 were investigated by linear regression and multivariate analysis.

resultsFour SNPs (rs174537, rs174546, rs174556, rs174601) in FADS1/FADS2 were significantly associated with SAT fatty acids. All SNPs were in high linkage disequilibrium with the commonly reported rs174537 SNP in FADS1. Minor allele carriers for rs174537 (GT+TT) had reduced 20:4n-6 (p = 1.74E-5), lower delta-5 desaturase enzyme activity (p = 2.09E-9), and lower FADS1 gene expression (p = 0.03) compared to major GG carriers. Multivariate analysis revealed that 20:4n-6 and 20:3n-6 explained ~19% of the variance between rs174537 genotypes, while gene expression explained <7%. Receiver operating characteristic (ROC) curves indicated that rs174537 genotype can be distinguished with SAT fatty acids (AUC = 0.842), but not gene expression (AUC = 0.627). No differences in SAT inflammatory gene expression were observed between rs174537 genotypes. SAT 20:3n-6 levels were positively correlated with the expression of several inflammatory genes, and inversely correlated with FADS1 expression.

conclusionThis study showed that FADS1 genotype is distinguished by SAT fatty acid profiles, but not inflammatory gene expression.

Indexed as

AdultCell DifferentiationDelta-5 Fatty Acid DesaturaseFatty Acid DesaturasesFatty AcidsFemaleGene ExpressionGenotypeHumansImmune SystemInflammationLinear ModelsLipid MetabolismMaleMiddle AgedMultigene FamilyDelta-5 Fatty Acid DesaturaseFADS1 protein, humanFADS2 protein, humanFatty Acid DesaturasesFatty Acids

Identifiers

PMID30082751
OpenAlexW2885287613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.