Evidence map›Paper›PMID 30082430›Full record

ArticleBlood advances2018

CD40L/IL-4-stimulated CLL demonstrates variation in translational regulation of DNA damage response genes including ATM.

Larissa Lezina, Ruth V Spriggs, Daniel Beck, Carolyn Jones, Kate M Dudek, Aleksandra Bzura, George D D Jones, Graham Packham, Anne E Willis, Simon D Wagner

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Blood advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. PeerJ · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Regulating tumor suppressor genes: post-translational modifications.Signal transduction and targeted therapy · 2020
    Review
  11. Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Larissa LezinaLeicester Cancer Research Centre and.
Ruth V SpriggsMedical Research Council Toxicology Unit, Leicester, United Kingdom; and.
Daniel BeckLeicester Cancer Research Centre and.
Carolyn JonesMedical Research Council Toxicology Unit, Leicester, United Kingdom; and.
Kate M DudekMedical Research Council Toxicology Unit, Leicester, United Kingdom; and.
Aleksandra BzuraLeicester Cancer Research Centre and.
George D D JonesLeicester Cancer Research Centre and.
Graham PackhamCancer Research UK Centre, Cancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, United Kingdom.
Anne E WillisMedical Research Council Toxicology Unit, Leicester, United Kingdom; and.
Simon D WagnerLeicester Cancer Research Centre and.
Medical Research Council · GBOccupational Cancer Research Centre · CACancer Research UK · GBUniversity of Leicester · GB

Funding

Cancer Research UK 23669Medical Research Council MC_UP_A600_1023Medical Research Council MC_UU_00025/7
6 · The paper itself

Abstract

CD40L/interleukin-4 (IL-4) stimulation occurs in vivo in the tumor microenvironment and induces global translation to varying degrees in individuals with chronic lymphocytic leukemia (CLL) in vitro. However, the implications of CD40L/IL-4 for the translation of specific genes is not known. To determine the most highly translationally regulated genes in response to CD40L/IL-4, we carried out ribosome profiling, a next-generation sequencing method. Significant differences in the translational efficiency of DNA damage response genes, specifically ataxia-telangiectasia-mutated kinase (ATM) and the MRE11/RAD50/NBN (MRN) complex, were observed between patients, suggesting different patterns of translational regulation. We confirmed associations between CD40L/IL-4 response and baseline ATM levels, induction of ATM, and phosphorylation of the ATM targets, p53 and H2AX. X-irradiation was used to demonstrate that CD40L/IL-4 stimulation tended to improve DNA damage repair. Baseline ATM levels, independent of the presence of 11q deletion, correlated with overall survival (OS). Overall, we suggest that there are individual differences in translation of specific genes, including ATM, in response to CD40L/IL-4 and that these interpatient differences might be clinically important.

Indexed as

DNA DamageAtaxia Telangiectasia Mutated ProteinsCD40 LigandFemaleGamma RaysHistonesHumansInterleukin-4Leukemia, Lymphocytic, Chronic, B-CellMaleProtein BiosynthesisTumor MicroenvironmentTumor Suppressor Protein p53Ataxia Telangiectasia Mutated ProteinsATM protein, humanCD40 LigandH2AX protein, humanHistonesIL4 protein, humanInterleukin-4TP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID30082430
PMCPMC6093746
OpenAlexW2890395064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.