Evidence map›Paper›PMID 30081831›Full record

ArticleBMC plant biology2018

RNA-seq analysis of lignocellulose-related genes in hybrid Eucalyptus with contrasting wood basic density.

Katsuhiko Nakahama, Nobuaki Urata, Tomotaka Shinya, Kazunori Hayashi, Kazuya Nanto, Antonio C Rosa, Akiyoshi Kawaoka

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katsuhiko NakahamaNippon Paper Industries Co., Ltd., Agri-Biotechnology Research Laboratory, 5-21-1 Oji, Kita-ku, Tokyo, 114-0002, Japan.
Nobuaki UrataNippon Paper Industries Co., Ltd., Agri-Biotechnology Research Laboratory, 5-21-1 Oji, Kita-ku, Tokyo, 114-0002, Japan.
Tomotaka ShinyaNippon Paper Industries Co., Ltd., Agri-Biotechnology Research Laboratory, 5-21-1 Oji, Kita-ku, Tokyo, 114-0002, Japan.
Kazunori HayashiForest Research Division, Amapá Florestal e Celulose S.A, Rua Claudio Lucio Menteiro, S/N, Santana, Amapa, 68925-000, Brazil.
Kazuya NantoNippon Paper Industries Co., Ltd., Agri-Biotechnology Research Laboratory, 5-21-1 Oji, Kita-ku, Tokyo, 114-0002, Japan.
Antonio C RosaForest Research Division, Amapá Florestal e Celulose S.A, Rua Claudio Lucio Menteiro, S/N, Santana, Amapa, 68925-000, Brazil.
Akiyoshi KawaokaNippon Paper Industries Co., Ltd., Agri-Biotechnology Research Laboratory, 5-21-1 Oji, Kita-ku, Tokyo, 114-0002, Japan. a.kawaoka@akita-jujo.co.jp.ORCID http://orcid.org/0000-0002-1692-1854
Nippon Paper Industries (Japan) · JPAkita Industrial Technology Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWood basic density (WBD), the biomass of plant cell walls per unit volume, is an important trait for elite tree selection in kraft pulp production. Here, we investigated the correlation between WBD and wood volumes or wood properties using 98 open-pollinated, 2.4 to 2.8 year-old hybrid Eucalyptus (Eucalyptus urophylla x E. grandis). Transcript levels of lignocellulose biosynthesis-related genes were studied.

resultsThe progeny plants had average WBD of 516 kg/m

conclusionsMost lignocellulose biosynthesis related genes exhibited a tendency to transcribe at relatively higher level in high WBD plants. These results suggest that lignocellulose biosynthesis-related genes may be associated with WBD.

Indexed as

CelluloseEucalyptusGene Expression ProfilingGenes, PlantLigninMicrosatellite RepeatsPolymerase Chain ReactionSequence Analysis, RNASpectroscopy, Near-InfraredTranscription FactorsWoodXylansCelluloseLigninlignocelluloseTranscription FactorsXylansCelluloseHemicelluloseHybrid EucalyptusLigninRNA-SeqWood basic density

Identifiers

PMID30081831
PMCPMC6080517
OpenAlexW2885454963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.