Evidence map›Paper›PMID 30080895›Full record

ArticlePloS one2018

Nutrient supply alters transcriptome regulation in adipose tissue of pre-weaning Holstein calves.

Leonel N Leal, Josue M Romao, Guido J Hooiveld, Fernando Soberon, Harma Berends, Mark V Boekshoten, Michael E Van Amburgh, Javier Martín-Tereso, Michael A Steele

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Leonel N LealTrouw Nutrition R&D, Amersfoort, Utrecht, the Netherlands.ORCID 0000-0002-7798-3995
Josue M RomaoDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.
Guido J HooiveldNutrition, Metabolomics and Genomics group, Division of Human Nutrition, Wageningen University, Wageningen, Gelderland, the Netherlands.
Fernando SoberonTrouw Nutrition USA, Highland, Illinois, United States of America.
Harma BerendsTrouw Nutrition R&D, Amersfoort, Utrecht, the Netherlands.
Mark V BoekshotenNutrition, Metabolomics and Genomics group, Division of Human Nutrition, Wageningen University, Wageningen, Gelderland, the Netherlands.
Michael E Van AmburghDepartment of Animal Science, Cornell University, Ithaca, New York, United States of America.
Javier Martín-TeresoTrouw Nutrition R&D, Amersfoort, Utrecht, the Netherlands.
Michael A SteeleDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.ORCID 0000-0001-6941-6205
University of Alberta · CAWageningen University & Research · NLCornell University · USHighland Community College - Illinois · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Performance of dairy cows can be influenced by early life nutrient supply. Adipose tissue is diet sensitive and an important component in that process as it is involved in the regulation of energetic, reproductive and immunological functions. However, it is not clear how early life nutrition alters the molecular regulation of adipose tissue in calves and potentially adult individuals. This study aimed at determining how differences in pre-weaning nutrient supply alter gene expression profiles and physiology in omental adipose tissue. A total of 12 female Holstein calves were fed two levels of milk replacer supply: a restricted amount of 11.72 MJ of metabolizable energy (ME) intake per day (n = 6) or an enhanced amount of 1.26 MJ ME intake per kg of metabolic body weight (BW0.75), resulting in supply from 17.58 to 35.17 MJ ME intake per day (n = 6). All calves had ad libitum access to a commercial calf starter and water. Analysis of the transcriptome profiles at 54 ± 2 days of age revealed that a total of 396 out of 19,968 genes were differentially expressed (DE) between groups (p < 0.001, FDR < 0.1). The directional expression of DE genes through Ingenuity Pathway Analysis showed that an enhanced nutrient supply alters adipose tissue physiology of pre-weaned calves. Several biological functions were increased (Z-score > +2), including Lipid Metabolism (Fatty Acid Metabolism), Cell Cycle (Entry into Interphase, Interphase, Mitosis and Cell Cycle Progression), Cellular Assembly and Organization (Cytoskeleton Formation and Cytoplasm Development) and Molecular Transport (Transport of Carboxylic Acid). These changes were potentially orchestrated by the activation/inhibition of 17 upstream regulators genes. Our findings indicate that adipose tissue of calves under an enhanced nutrient supply is physiologically distinct from restricted calves due to an increased development/expansion rate and also a higher metabolic activity through increased fatty acid metabolism.

Indexed as

TranscriptomeWeaningAdipose TissueAnimal FeedAnimal Nutritional Physiological PhenomenaAnimalsCattleComputational BiologyFatty AcidsGene Expression ProfilingGene Expression RegulationLipid MetabolismMitosisModels, BiologicalNutrientsFatty AcidsNutrients

Identifiers

PMID30080895
PMCPMC6078305
OpenAlexW2887059009

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.