Evidence map›Paper›PMID 30079806›Full record

ArticleEpigenetics2018

Aberrant imprinting in mouse trophoblast stem cells established from somatic cell nuclear transfer-derived embryos.

Michiko Hirose, Masashi Hada, Satoshi Kamimura, Shogo Matoba, Arata Honda, Kaori Motomura, Narumi Ogonuki, Hossam H Shawki, Kimiko Inoue, Satoru Takahashi and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Epigenetic Reprogramming and Somatic Cell Nuclear Transfer.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
  5. The Placental Function Beyond Pregnancy: Insights from Latin America.Advances in experimental medicine and biology · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Insights into the roles of sperm in animal cloning.Stem cell research & therapy · 2020
    Review
  11. Article
  12. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Michiko Hirosea RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Masashi Hadaa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Satoshi Kamimuraa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.ORCID 0000-0002-5615-2674
Shogo Matobaa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Arata Hondaa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Kaori Motomuraa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Narumi Ogonukia RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Hossam H Shawkic Department of Anatomy and Embryology , University of Tsukuba , Ibaraki , Japan.
Kimiko Inouea RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.
Satoru Takahashic Department of Anatomy and Embryology , University of Tsukuba , Ibaraki , Japan.
Atsuo Oguraa RIKEN BioResource Research Center , Tsukuba , Ibaraki , Japan.ORCID 0000-0003-0447-1988
RIKEN BioResource Research Center · JPUniversity of Tsukuba · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although phenotypic abnormalities frequently appear in the placenta following somatic cell nuclear transfer (SCNT), mouse trophoblast stem cells (TSCs) established from SCNT embryos reportedly show no distinct abnormalities compared with those derived from normal fertilization. In this study, we reexamined SCNT-TSCs to identify their imprinting statuses. Placenta-specific maternally imprinted genes (Gab1, Slc38a4, and Sfmbt2) consistently showed biallelic expression in SCNT-TSCs, suggesting their loss of imprinting (LOI). The LOI of Gab1 was associated with decreased DNA methylation, and that of Sfmbt2 was associated with decreased DNA methylation and histone H3K27 trimethylation. The maternal allele of the intergenic differentially methylated region (IG-DMR) was aberrantly hypermethylated following SCNT, even though this region was prone to demethylation in TSCs when established in a serum-free chemically defined medium. These findings indicate that the development of cloned embryos is associated with imprinting abnormalities specifically in the trophoblast lineage from its initial stage, which may affect subsequent placental development.

Indexed as

Epigenesis, GeneticGenomic ImprintingAdaptor Proteins, Signal TransducingAmino Acid Transport System AAnimalsBlastocystCloning, OrganismDNA MethylationEmbryonic Stem CellsFemaleMiceMice, Inbred C57BLNuclear Transfer TechniquesPhosphoproteinsPlacentaPlacentationAdaptor Proteins, Signal TransducingAmino Acid Transport System AGab1 protein, mousePhosphoproteinsRepressor ProteinsSfmbt2 protein, mouseSlc38a4 protein, mouseTranscription FactorsIG-DMRimprintingmouseNuclear transferplacentatrophoblast stem cell

Identifiers

PMID30079806
PMCPMC6224209
OpenAlexW2885665698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.