Evidence map›Paper›PMID 30078389›Full record

ArticleBMB reports2019

OAS1 and OAS3 negatively regulate the expression of chemokines and interferon-responsive genes in human macrophages.

Wook-Bin Lee, Won Young Choi, Dong-Hyun Lee, Hyeran Shim, Jeongsil Kim-Ha, Young-Joon Kim

Open access · goldAbstract read
In one paragraph

Article in BMB reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wook-Bin LeeKorean Institute of Science and Technology (KIST), Gangneung Institute of Natural Products, Gangneung 25451, Korea.
Won Young ChoiDepartment of Integrated Omics for Biomedical Science, Graduate School, Yonsei University, Seoul 03722, Korea.
Dong-Hyun LeeDepartment of Integrated Omics for Biomedical Science, Graduate School, Yonsei University, Seoul 03722, Korea.
Hyeran ShimDepartment of Integrative Bioscience and Biotechnology, College of Life Sciences, Sejong University, Seoul 05006; Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 03722, Korea.
Jeongsil Kim-HaDepartment of Integrative Bioscience and Biotechnology, College of Life Sciences, Sejong University, Seoul 05006, Korea.
Young-Joon KimDepartment of Integrated Omics for Biomedical Science, Graduate School, Yonsei University, Seoul 03722; Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 03722, Korea Korea.
Yonsei University · KRSejong University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Upon viral infection, the 2', 5'-oligoadenylate synthetase (OAS)-ribonuclease L (RNaseL) system works to cleave viral RNA, thereby blocking viral replication. However, it is unclear whether OAS proteins have a role in regulating gene expression. Here, we show that OAS1 and OAS3 act as negative regulators of the expression of chemokines and interferonresponsive genes in human macrophages. Clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein-9 nuclease (Cas9) technology was used to engineer human myeloid cell lines in which the OAS1 or OAS3 gene was deleted. Neither OAS1 nor OAS3 was exclusively responsible for the degradation of rRNA in macrophages stimulated with poly(I:C), a synthetic surrogate for viral double-stranded (ds)RNA. An mRNA sequencing analysis revealed that genes related to type I interferon signaling and chemokine activity were increased in OAS1-/- and OAS3-/- macrophages treated with intracellular poly(I:C). Indeed, retinoic-acid-inducible gene (RIG)-I- and interferon-induced helicase C domain-containing protein (IFIH1 or MDA5)-mediated induction of chemokines and interferon-stimulated genes was regulated by OAS3, but Toll-like receptor 3 (TLR3)- and TLR4-mediated induction of those genes was modulated by OAS1 in macrophages. However, stimulation of these cells with type I interferons had no effect on OAS1- or OAS3-mediated chemokine secretion. These data suggest that OAS1 and OAS3 negatively regulate the expression of chemokines and interferon-responsive genes in human macrophages. [BMB Reports 2019; 52(2): 133-138].

Indexed as

2',5'-Oligoadenylate SynthetaseCell LineChemokinesCRISPR-Cas SystemsEndoribonucleasesGene Expression RegulationGene Knockout TechniquesHumansInterferonsLipopolysaccharidesMacrophagesPoly I-CRNA, Double-StrandedRNA, ViralTransfectionVirus Replication2-5A-dependent ribonuclease2',5'-Oligoadenylate SynthetaseChemokinesEndoribonucleasesInterferonsLipopolysaccharidesOAS1 protein, humanOAS3 protein, humanPoly I-CRNA, Double-StrandedRNA, Viral

Identifiers

PMID30078389
PMCPMC6443328
OpenAlexW2923177995

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.