ArticleBMC plant biology2018
DNA barcoding of the genus Nepenthes (Pitcher plant): a preliminary assessment towards its identification.
Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Article
- Complete Mitogenome of theGenes · 2023Article
- Evaluation of Arabian Vascular Plant Barcodes (rbcL and matK): Precision of Unsupervised and Supervised Learning Methods towards Accurate Identification.Plants (Basel, Switzerland) · 2021Article
- Developing an efficient DNA barcoding system to differentiate between Lilium species.BMC plant biology · 2021Article
- rbcL, a potential candidate DNA barcode loci for aconites: conservation of himalayan aconites.Molecular biology reports · 2021Article
- Integration of advanced technologies for plant variety and cultivar identification.Journal of biosciences · 2021Review
- The low copy nuclear region, RPB2 as a novel DNA barcode region for species identification in the rattan genusPhysiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Development of high-resolution DNA barcodes forEcology and evolution · 2019Article
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Authors and funding
2 authors.
Funding
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Abstract
backgroundDNA barcoding is impending towards the generation of universal standards for species discrimination with a standard gene region that can be sequenced accurately and within short span of time. In this study, we were successful in developing efficient barcode locus in the Nepenthes genus. A total of 317 accessions were retrieved from GenBank of NCBI which represent 140 different species Nepenthes and evaluated the efficacy of ITS, rbcl and matK barcode candidates using barcode gap, applied distance similarity, and tree-based methods.
resultOur result indicates that single-locus ITS or combined with plastid regions (matK) showed the best species discrimination with distinctive barcoding gaps. Therefore, we tentatively proposed the combination of ITS+matK as a core barcode for Nepenthes genus.
conclusionThis study provides a report on DNA barcoding for unique insectivores' Nepenthes genus. As the different species of Nepenthes are higly endemic and endangered, it would be a useful study to understand the evolutionary relationship, sketched in emigration, mislabeling and can be a probable assessment for its biodiversity.
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