Evidence map›Paper›PMID 30075149›Full record

ArticleThe American journal of pathology2018

Chaperone-Mediated Autophagy Promotes Beclin1 Degradation in Persistently Infected Hepatitis C Virus Cell Culture.

Yucel Aydin, Christopher M Stephens, Srinivas Chava, Zahra Heidari, Rajesh Panigrahi, Donkita D Williams, Kylar Wiltz, Antoinette Bell, Wallace Wilson, Krzysztof Reiss and 1 more

Open access · greenAbstract read
In one paragraph

Article in The American journal of pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Inflammasomes and autophagy in cancer: unlocking targeted therapies.Naunyn-Schmiedeberg's archives of pharmacology · 2025
    Review
  4. Article
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  6. Article
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  8. Article
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  10. Article
  11. Dysfunction of chaperone-mediated autophagy in human diseases.Molecular and cellular biochemistry · 2021
    Review
  12. Article
  13. The Role of Chaperone-Mediated Autophagy in Hepatitis C Virus-Induced Pathogenesis.Frontiers in cellular and infection microbiology · 2021
    Review
  14. Review
  15. Review
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yucel AydinDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Christopher M StephensDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Srinivas ChavaDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Zahra HeidariDepartment of Chemical and Biomedical Engineering, Tulane University, New Orleans, Louisiana.
Rajesh PanigrahiDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Donkita D WilliamsDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Kylar WiltzDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Antoinette BellDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Wallace WilsonDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana.
Krzysztof ReissLouisiana State University Health Sciences Center, New Orleans, Louisiana.
Srikanta DashDepartment of Pathology and Laboratory Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana. Electronic address: sdash@tulane.edu.
Tulane University · USLouisiana State University Health Sciences Center New Orleans · US

Funding

Tracking & Evaluation CoreU54GM104940 · NIGMS · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI Peter Todd Katzmarzyk · 2012 to 2026
$69.1M
Translational Genomics Core (TGC)P20GM121288 · NIGMS · LSU HEALTH SCIENCES CENTER · PI Luis Del Valle · 2017 to 2026
$22.4M
Hepatitis C Virus and Hepatocellular CarcinomaR01CA089121 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI DASH, SRIKANTA · 2001 to 2016
$2.7M
IL-28B genotype and HCV treatment clearanceR01AI103106 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI DASH, SRIKANTA · 2013 to 2016
$1.5M
NCI NIH HHS R01 CA089121NIAID NIH HHS R01 AI103106NIGMS NIH HHS P20 GM121288NIGMS NIH HHS U54 GM104940
6 · The paper itself

Abstract

Liver cirrhosis is an independent risk factor for hepatocellular carcinoma (HCC). The mechanisms that contribute to HCC development in the cirrhotic microenvironment are unknown. We found that HCC grown in the highly stressed cirrhotic microenvironment undergoes autophagy switching from a protective state characterized by high macroautophagy with low chaperone-mediated autophagy (CMA) to an HCC-promoting state characterized by low macroautophagy with high CMA. This study examined how the stress response executes oncogenic cell programming through autophagy switching using hepatitis C virus cell culture. Protein kinase R-like endoplasmic reticulum kinase expression increased to high levels in hepatitis C virus culture. Protein kinase R-like endoplasmic reticulum kinase-dependent activation of nuclear factor erythroid 2-related factor (Nrf2) led to increased transcription of the cytoprotective genes: heat shock cognate 70 kDa protein and lysosome-associated membrane protein 2A (LAMP2A) and precipitated the induction of CMA. CMA selectively targeted beclin1 degradation, leading to accumulation of the autophagy flux protein p62 due to impaired autophagosome-endosome fusion. This impaired autophagosome-endosome fusion due to beclin1 degradation inhibited endocytosis and degradation of epidermal growth factor receptor. Silencing Nrf2 and LAMP2A reduced cell viability, suggesting that the stress response activates CMA as a compensatory mechanism of cell survival. We report a novel mechanism through which stress response triggers oncogenic Nrf2 signaling that promotes autophagy switching to favor cell survival.

Indexed as

AutophagyBeclin-1Cells, CulturedCell SurvivalGene SilencingHepacivirusHepatitis C, ChronicHepatocytesHumansLysosomal-Associated Membrane Protein 3Lysosomal Membrane ProteinsMolecular ChaperonesNeoplasm ProteinsNF-E2-Related Factor 2Signal TransductionStress, PhysiologicalBeclin-1LAMP3 protein, humanLysosomal-Associated Membrane Protein 3Lysosomal Membrane ProteinsMolecular ChaperonesNeoplasm ProteinsNFE2L2 protein, humanNF-E2-Related Factor 2

Identifiers

PMID30075149
PMCPMC6168955
OpenAlexW2885509957

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.