Evidence map›Paper›PMID 30075111›Full record

ArticleAmerican journal of human genetics2018

Bi-allelic Recessive Loss-of-Function Variants in FANCM Cause Non-obstructive Azoospermia.

Laura Kasak, Margus Punab, Liina Nagirnaja, Marina Grigorova, Ave Minajeva, Alexandra M Lopes, Anna Maria Punab, Kenneth I Aston, Filipa Carvalho, Eve Laasik and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 129 citations in OpenAlex.

  1. Novel IFT140 variants cause spermatogenic dysfunction in humans.Molecular genetics & genomic medicine · 2019
    Trial
  2. Journal of medical genetics · 2026
    Article
  3. Double jeopardy: howFrontiers in cell and developmental biology · 2026
    Review
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  19. Cell genomics · 2023
    Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 5 countries.

Laura KasakInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia.
Margus PunabAndrology Centre, Tartu University Hospital, Tartu 50406, Estonia.
Liina NagirnajaDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.
Marina GrigorovaInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia.
Ave MinajevaInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia.
Alexandra M LopesIPATIMUP - Institute of Molecular Pathology and Immunology of the University of Porto, Porto 4200-135, Portugal; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto 4200-135, Portugal.
Anna Maria PunabInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia.
Kenneth I AstonDivision of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.
Filipa Carvalhoi3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto 4200-135, Portugal; Serviço de Genética, Departamento de Patologia, Faculdade de Medicina da Universidade do Porto, Porto 4200-319, Portugal.
Eve LaasikInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia.
Lee B SmithMRC Centre for Reproductive Health, University of Edinburgh, Edinburgh EH16 4TJ, UK; School of Environmental and Life Sciences, University of Newcastle, Callaghan, NSW 2308, Australia.
GEMINI Consortium
Donald F ConradDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Maris LaanInstitute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia. Electronic address: maris.laan@ut.ee.
University of Tartu · EEUniversidade do Porto · PTWashington University in St. Louis · USTartu University Hospital · EEUniversity of Edinburgh · GBUniversity of Utah · US

Funding

GENOMICS OF SPERMATOGENIC IMPAIRMENTR01HD078641 · NICHD · WASHINGTON UNIVERSITY · PI Kenneth Ivan Aston, DONALD F. CONRAD · 2014 to 2026
$6.3M
Analysis of de novo mutation from sequencing of related individuals and cellsR01HG007178 · NHGRI · WASHINGTON UNIVERSITY · PI CONRAD, DONALD F. · 2014 to 2018
$2.6M
MODELING THE EFFECTS OF STRUCTURAL VARIATION IN GTEX DATA AND MENDELIAN DISEASER01MH101810 · NIMH · WASHINGTON UNIVERSITY · PI CONRAD, DONALD F. · 2013 to 2016
$1.3M
NHGRI NIH HHS R01 HG007178NICHD NIH HHS R01 HD078641NIMH NIH HHS R01 MH101810
6 · The paper itself

Abstract

Infertility affects around 7% of men worldwide. Idiopathic non-obstructive azoospermia (NOA) is defined as the absence of spermatozoa in the ejaculate due to failed spermatogenesis. There is a high probability that NOA is caused by rare genetic defects. In this study, whole-exome sequencing (WES) was applied to two Estonian brothers diagnosed with NOA and Sertoli cell-only syndrome (SCOS). Compound heterozygous loss-of-function (LoF) variants in FANCM (Fanconi anemia complementation group M) were detected as the most likely cause for their condition. A rare maternally inherited frameshift variant p.Gln498Thrfs

Indexed as

AdultAnimalsAzoospermiaBreast NeoplasmsCodon, NonsenseDNA HelicasesExome SequencingFemaleFrameshift MutationGene SilencingGenetic Predisposition to DiseaseHomozygoteHumansLoss of HeterozygosityMaleMiceCodon, NonsenseDNA HelicasesFANCM protein, humanbi-allelic loss-of-function variantsFANCMgenetic cause of male infertilityimmunohistochemistrynon-obstructive azoospermiaprostateSCOSSertoli cell-only syndromespermatogenesistesticular biopsywhole-exome sequencing

Identifiers

PMID30075111
PMCPMC6080835
OpenAlexW2887935585

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.