Evidence map›Paper›PMID 30074286›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2018

2-Allyl- and Propargylamino-dATPs for Site-Specific Enzymatic Introduction of a Single Modification in the Minor Groove of DNA.

Ján Matyašovský, Radek Pohl, Michal Hocek

Open access · hybridAbstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Synthesis of Adenine Nucleosides with a Reactive (Molecules (Basel, Switzerland) · 2025
    Article
  3. Review
  4. Covalent labeling of nucleic acids.Chemical Society reviews · 2020
    Review
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ján MatyašovskýInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610, Prague 6, Czech Republic.
Radek PohlInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610, Prague 6, Czech Republic.
Michal HocekInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610, Prague 6, Czech Republic.ORCID http://orcid.org/0000-0002-1113-2047
Charles University · CZCzech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZ

Funding

Akademie Věd České Republiky Praemium AcademiaeEuropean Regional Development Fund CZ.02.1.01/0.0/0.0/16_019/0000729Grantová Agentura České Republiky 17-03419SGrantová Agentura České Republiky 18-03305SH2020 Marie Skłodowska-Curie Actions H2020-MSCA-ITN-2014-642023
6 · The paper itself

Abstract

A series of 2-alkylamino-2'-deoxyadenosine triphosphates (dATP) was prepared and found to be substrates for the Therminator DNA polymerase, which incorporated only one modified nucleotide into the primer. Using a template encoding for two consecutive adenines, conditions were found for incorporation of either one or two modified nucleotides. In all cases, addition of a mixture of natural dNTPs led to primer extension resulting in site-specific single modification of DNA in the minor groove. The allylamino-substituted DNA was used for the thiol-ene addition, whereas the propargylamino-DNA for the CuAAC click reaction was used to label the DNA with a fluorescent dye in the minor groove. The approach was used to construct FRET probes for detection of oligonucleotides.

Indexed as

Allyl CompoundsDeoxyadenine NucleotidesDNAFluorescence Resonance Energy TransferFluorescent DyesNucleic Acid ConformationOligonucleotidesPargylinePropylamines2'-deoxyadenosine triphosphateAllyl CompoundsDeoxyadenine NucleotidesDNAFluorescent DyesOligonucleotidesPargylinepropargylaminePropylaminesDNAfluorescent probesnucleotidesoligonucleotidespolymerases

Identifiers

PMID30074286
PMCPMC6221035
OpenAlexW2885477676

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.