Evidence map›Paper›PMID 30073749›Full record

ArticleMolecular plant pathology2018

Deciphering the functions of the outer membrane porin OprBXo involved in virulence, motility, exopolysaccharide production, biofilm formation and stress tolerance in Xanthomonas oryzae pv. oryzae.

Nahee Bae, Hye-Jee Park, Hanbi Park, Minyoung Kim, Sang-Wook Han

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  7. Pathogens (Basel, Switzerland) · 2020
    Article
  8. Article
  9. Article
  10. Elucidating Functions of FleQ inInternational journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Nahee BaeDepartment of Integrative Plant Science, Chung-Ang University, Anseong, 17546, South Korea.
Hye-Jee ParkDepartment of Integrative Plant Science, Chung-Ang University, Anseong, 17546, South Korea.
Hanbi ParkDepartment of Integrative Plant Science, Chung-Ang University, Anseong, 17546, South Korea.
Minyoung KimDepartment of Integrative Plant Science, Chung-Ang University, Anseong, 17546, South Korea.
Sang-Wook HanDepartment of Integrative Plant Science, Chung-Ang University, Anseong, 17546, South Korea.ORCID 0000-0002-0893-1438
Chung-Ang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzae (Xoo) is a Gram-negative bacterium causing bacterial leaf blight disease in rice. Previously, proteomic analysis has shown that the outer membrane protein B in Xoo (OprBXo) is more abundant in the wildtype strain than is the outer membrane protein 1 in the Xoo (Omp1X) knockout mutant. OprBXo shows high homology with OprB, which has been well characterized as a carbohydrate-selective porin in X. citri ssp. citri and Pseudomonas species. However, the functions of OprBXo in Xoo have not yet been documented. To elucidate the functions of OprBXo, we generated the OprBXo-overexpressing mutant, Xoo(OprBXo), and the knockout mutant, XooΔoprBXo(EV). We found that the virulence and migration of Xoo(OprBXo), but not XooΔoprBXo(EV), were markedly reduced in rice. To postulate the mechanisms affected by OprBXo, comparative proteomic analysis was performed. Based on the results of proteomics, we employed diverse phenotypic assays to characterize the functions of OprBXo. Abnormal twitching motility and reduction in swarming motility were observed in Xoo(OprBXo). Moreover, Xoo(OprBXo) decreased, but XooΔoprBXo(EV) enhanced, exopolysaccharide production and biofilm formation. The chemotactic ability of XooΔoprBXo(EV) was dramatically lower than that of Xoo(EV) in the presence of glucose and xylose. Xoo(OprBXo) was resistant to sodium dodecylsulphate and hydrogen peroxide, but XooΔoprBXo(EV) was highly sensitive compared with Xoo(EV). Thus, OprBXo is not only essential for chemotaxis and stress tolerance, but also for motility, biofilm formation and exopolysaccharide production, which may contribute to the virulence of Xoo. These results will lead to new insights into the functions of a sugar-selective porin in Xoo.

Indexed as

Adaptation, PhysiologicalMovementStress, PhysiologicalAmino Acid SequenceBacterial ProteinsBiofilmsChemotaxisHydrogen PeroxidePolysaccharides, BacterialPorinsProteomicsSodium Dodecyl SulfateVirulenceXanthomonasBacterial ProteinsHydrogen PeroxidePolysaccharides, BacterialPorinsSodium Dodecyl SulfateOprBXoporinproteomicsvirulenceXanthomona oryzae pv. oryzae

Identifiers

PMID30073749
PMCPMC6638129
OpenAlexW2885760162

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.