Evidence map›Paper›PMID 30072686›Full record

ArticleNature communications2018

Cysteine-mediated decyanation of vitamin B12 by the predicted membrane transporter BtuM.

S Rempel, E Colucci, J W de Gier, A Guskov, D J Slotboom

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Cobalt-Sulfur Coordination Chemistry Drives BJournal of the American Chemical Society · 2023
    Article
  8. Vitamin BGenes · 2023
    Article
  9. Engineering a Conformationally Switchable Artificial Metalloprotein.Journal of the American Chemical Society · 2022
    Article
  10. Review
  11. An Interprotein Co-S Coordination Complex in the BJournal of the American Chemical Society · 2020
    Article
  12. Review
  13. Elevator-type mechanisms of membrane transport.Biochemical Society transactions · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

S RempelGroningen Biomolecular and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9474 AG, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-3569-8229
E ColucciGroningen Biomolecular and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9474 AG, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-3569-691X
J W de GierDepartment of Biochemistry and Biophysics, Stockholm University, 10691, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-5537-4358
A GuskovGroningen Biomolecular and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9474 AG, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-2340-2216
D J SlotboomGroningen Biomolecular and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9474 AG, Groningen, The Netherlands. d.j.slotboom@rug.nl.ORCID http://orcid.org/0000-0002-5804-9689

Funding

European Research Council 282083
6 · The paper itself

Abstract

Uptake of vitamin B12 is essential for many prokaryotes, but in most cases the membrane proteins involved are yet to be identified. We present the biochemical characterization and high-resolution crystal structure of BtuM, a predicted bacterial vitamin B12 uptake system. BtuM binds vitamin B12 in its base-off conformation, with a cysteine residue as axial ligand of the corrin cobalt ion. Spectroscopic analysis indicates that the unusual thiolate coordination allows for decyanation of vitamin B12. Chemical modification of the substrate is a property other characterized vitamin B12-transport proteins do not exhibit.

Indexed as

Bacterial ProteinsBiocatalysisCrystallography, X-RayCysteineEscherichia coliKineticsMembrane Transport ProteinsModels, MolecularThiobacillusVitamin B 12Bacterial ProteinsCysteineMembrane Transport ProteinsVitamin B 12

Identifiers

PMID30072686
PMCPMC6072759

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.