Evidence map›Paper›PMID 30072397›Full record

ArticleCancer research2018

A Targeted Quantitative Proteomic Approach Assesses the Reprogramming of Small GTPases during Melanoma Metastasis.

Ming Huang, Tianyu F Qi, Lin Li, Gao Zhang, Yinsheng Wang

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  5. Review
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  10. Article
  11. Subversion of Ras Small GTPases in Cutaneous Melanoma Aggressiveness.Frontiers in cell and developmental biology · 2020
    Review
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ming HuangEnvironmental Toxicology Graduate Program, University of California, Riverside, Riverside, California.
Tianyu F QiEnvironmental Toxicology Graduate Program, University of California, Riverside, Riverside, California.
Lin LiDepartment of Chemistry, University of California, Riverside, Riverside, California.
Gao ZhangThe Wistar Institute, Philadelphia, Pennsylvania.
Yinsheng WangEnvironmental Toxicology Graduate Program, University of California, Riverside, Riverside, California. yinsheng.wang@ucr.edu.
University of California, Riverside · USThe Wistar Institute · US

Funding

Research Training in Environmental ToxicologyT32ES018827 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Yinsheng Wang · 2010 to 2026
$5.3M
Quantitative Adductomics Approaches for Assessing the Occurrence and Repair of DNA AdductsR01CA210072 · NCI · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2017 to 2021
$1.8M
NCI NIH HHS R01 CA210072NIEHS NIH HHS T32 ES018827
6 · The paper itself

Abstract

Small GTPases of the Ras superfamily are master regulators of intracellular trafficking and constitute essential signaling components in all eukaryotes. Aberrant small GTPase signaling is associated with a wide spectrum of human diseases, including cancer. Here, we developed a high-throughput, multiple reaction monitoring-based workflow, coupled with stable isotope labeling by amino acids in cell culture, for targeted quantification of approximately 100 small GTPases in cultured human cells. Using this method, we investigated the differential expression of small GTPases in three pairs of primary and metastatic melanoma cell lines. Bioinformatic analyses of The Cancer Genome Atlas data and other publicly available data as well as cell-based assays revealed previously unrecognized roles of RAB38 in promoting melanoma metastasis. Diminished promoter methylation and the subsequent augmented binding of transcription factor MITF contributed to elevated expression of

Indexed as

BiomarkersCell Line, TumorCell MovementComputational BiologyDisease ProgressionDNA MethylationEpigenesis, GeneticFibroblastsGene Expression Regulation, NeoplasticHCT116 CellsHEK293 CellsHumansIsotope LabelingJurkat CellsMCF-7 CellsMelanomaBiomarkersMicrophthalmia-Associated Transcription FactorMITF protein, humanMonomeric GTP-Binding ProteinsRAB27A protein, humanrab27 GTP-Binding ProteinsRAB38 protein, humanrab GTP-Binding Proteins

Identifiers

PMID30072397
PMCPMC6139071
OpenAlexW2887189375

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.