Evidence map›Paper›PMID 30072146›Full record

ArticleThe Lancet. Haematology2018

Assessment of ASC specks as a putative biomarker of pyroptosis in myelodysplastic syndromes: an observational cohort study.

Ashley A Basiorka, Kathy L McGraw, Farnoosh Abbas-Aghababazadeh, Amy F McLemore, Nicole D Vincelette, Grace A Ward, Erika A Eksioglu, David A Sallman, Najla Al Ali, Eric Padron and 11 more

Abstract read
In one paragraph

Article in The Lancet. Haematology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  15. Canonical and non-canonical functions of NLRP3.Journal of advanced research · 2023
    Review
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  17. Article
  18. NLRP3 inflammasome in neurodegenerative disease.Translational research : the journal of laboratory and clinical medicine · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Ashley A BasiorkaDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute and the Cancer Biology PhD Program, University of South Florida, Tampa, FL, USA.
Kathy L McGrawDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Farnoosh Abbas-AghababazadehDepartment of Biostatistics and Bioinformatics, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Amy F McLemoreDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Nicole D VinceletteDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Grace A WardDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute and the Cancer Biology PhD Program, University of South Florida, Tampa, FL, USA.
Erika A EksiogluDepartment of Immunology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
David A SallmanDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Najla Al AliDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Eric PadronDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Javier Pinilla-IbarzDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Rami KomrokjiDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Erico MasalaDepartment of Hematology, Universita' degli Studi di Firenze, AOU Careggi, Florence, Italy.
Valeria SantiniDepartment of Hematology, Universita' degli Studi di Firenze, AOU Careggi, Florence, Italy.
Olivier KosmiderHématologie Biologique, Hôpital Cochin, Assistance Publique-Hôpitaux de Paris, Paris, France.
Michaela FontenayHématologie Biologique, Hôpital Cochin, Assistance Publique-Hôpitaux de Paris, Paris, France.
Pierre FenauxGroupe Francophone des Myélodysplasies, Hopital Saint Louis, Paris, France.
Lubomir SokolDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Sheng WeiDepartment of Immunology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Brooke FridleyDepartment of Biostatistics and Bioinformatics, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Alan F ListDepartment of Malignant Hematology, H Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA. Electronic address: alan.list@moffitt.org.

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
Tumor Immunology Training Program -1 T32 CA115308-A1T32CA115308 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI WRIGHT, KENNETH LYNN · 2007 to 2017
$2.8M
Modulation of the S100A9/CD33 Pathway by the Flavonoids ICA and ICT on the TumorK01CA187020 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI EKSIOGLU, ERIKA ADRIANA · 2014 to 2018
$456k
NCI NIH HHS K01 CA187020NCI NIH HHS P30 CA076292NCI NIH HHS T32 CA115308
6 · The paper itself

Abstract

backgroundNLRP3 inflammasome-directed pyroptotic cell death drives ineffective haemopoiesis in myelodysplastic syndromes. During inflammasome assembly, the apoptosis-associated speck-like protein containing a CARD (PYCARD, commonly known as ASC) adaptor protein polymerises into large, filamentous clusters termed ASC specks that are released upon cytolysis. Specks are resistant to proteolytic degradation because of their prion-like structure, and therefore might serve as a biomarker for pyroptotic cell death in myelodysplastic syndromes.

methodsThis observational cohort study was done at the H Lee Moffitt Cancer Center (Tampa, FL, USA). Patients with myelodysplastic syndromes, healthy controls, and patients with non-myelodysplastic syndrome haematological cancers or type 2 diabetes were recruited. We used confocal and electron microscopy to visualise, and flow cytometry to quantify, ASC specks in peripheral blood and bone marrow plasma samples. Speck percentages were compared by t test or ANOVA, correlations were assessed by Spearman's rank correlation coefficient, and biomarker efficiency was assessed by receiver operating characteristics and area under the curve (AUC) analysis.

findingsBetween Jan 1, 2005, and Jan 12, 2017, we obtained samples from 177 patients with myelodysplastic syndromes and 29 healthy controls for the discovery cohort, and 113 patients with myelodysplastic syndromes and 31 healthy controls for the validation cohort. We also obtained samples from 22 patients with del(5q) myelodysplastic syndromes, 230 patients with non-myelodysplastic syndrome haematological cancers and 23 patients with type 2 diabetes. After adjustment for glucose concentration, the log

interpretationOur results underscore the pathobiological relevance of ASC specks and suggest that ASC specks are a sensitive and specific candidate plasma biomarker that provides an index of medullary pyroptotic cell death and ineffective haemopoiesis in patients with myelodysplastic syndromes.

fundingT32 Training Grant (NIH/NCI 5T32 CA115308-08), Edward P Evans Foundation, The Taub Foundation Grants Program, the Flow Cytometry, Analytic Microscopy, and Tissue Core Facilities at the H Lee Moffitt Cancer Center and Research Institute, a National Cancer Institute-designated Comprehensive Cancer Center (P30-CA076292).

Indexed as

PyroptosisAgedBiomarkersCARD Signaling Adaptor ProteinsCase-Control StudiesCohort StudiesFemaleHumansMaleMyelodysplastic SyndromesBiomarkersCARD Signaling Adaptor ProteinsPYCARD protein, human

Identifiers

PMID30072146
PMCPMC6505461

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.