Evidence map›Paper›PMID 30071859›Full record

ArticleMalaria journal2018

Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches.

Getasew Shitaye, Endalamaw Gadisa, Lynn Grignard, Girma Shumie, Wakweya Chali, Temesgen Menberu, Mulualem Belachew, Getaneh Tegegn, Sagni Challi, Jonathan Curry and 9 more

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Case Report: Primaquine Failure for Radical Cure ofThe American journal of tropical medicine and hygiene · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Prevalence of G6PD candidate variants in malaria-endemic populations of northern Brazil.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 3 countries.

Getasew ShitayeDepartment of Biomedical Sciences, School of Medical Sciences, Bahir Dar University, Bahir Dar, Ethiopia.
Endalamaw GadisaArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Lynn GrignardDepartment of Immunology and Infection, London School of Hygiene and Tropical Medicine, London, UK.
Girma ShumieArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Wakweya ChaliArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Temesgen MenberuArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Mulualem BelachewDepartment of Biomedical Sciences, School of Medical Sciences, Wolkite University, Wolkite, Ethiopia.
Getaneh TegegnDepartment of Biomedical Sciences, Semera University, Semera, Ethiopia.
Sagni ChalliArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Jonathan CurryGenomics Division, LGC Group ltd, Hertfordshire, UK.
Laleta MaheyGenomics Division, LGC Group ltd, Hertfordshire, UK.
Tsegaye HailuArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Hassen MamoDepartment of Microbial, Cellular and Molecular Biology, College of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Menakath MenonDepartment of Biochemistry, School of Medical Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Taye BalchaArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Abraham AseffaArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia.
Chris DrakeleyDepartment of Immunology and Infection, London School of Hygiene and Tropical Medicine, London, UK.
Teun BousemaDepartment of Immunology and Infection, London School of Hygiene and Tropical Medicine, London, UK.
Fitsum G TadesseArmauer Hansen Research Institute (AHRI), Addis Ababa, Ethiopia. fitsum.tadesse@radboudumc.nl.
Armauer Hansen Research Institute · ETAddis Ababa University · ETGenomics (United Kingdom) · GBLondon School of Hygiene & Tropical Medicine · GBBahir Dar University · ETRadboud University Medical Center · NLRadboud University Nijmegen · NLSamara University · ETWolkite University · ET

Funding

Bill & Melinda Gates foundation OP P1173572European Research Council ERC-2014-StG 639776Netherlands Organization for International Cooperation in Higher Education NFP-PhD.14/150Netherlands Organization for Scientific Research 016.158.306
6 · The paper itself

Abstract

background8-Aminoquinolines such as primaquine clear mature Plasmodium falciparum gametocytes that are responsible for transmission from human to mosquitoes and bring radical cure in Plasmodium vivax by clearing dormant liver stages. Deployment of primaquine is thus of relevance for malaria elimination efforts but challenged by the widespread prevalence of glucose-6-phosphate dehydrogenase deficiency (G6PDd) in endemic countries since primaquine in G6PDd individuals may lead to acute haemolysis. In this study, the prevalence of G6PDd was investigated in different settings in Ethiopia using phenotyping and genotyping approaches.

methodsCommunity and school based cross-sectional surveys were conducted from October to December 2016 in four administrative regions (Gambela, Benishangul Gumuz, Oromia, and Amhara) in Ethiopia. Finger prick blood samples were collected for G6PD enzyme activity using the CareStart™ G6PD screening test and genotyping of 36 selected single nucleotide polymorphisms (SNPs) located in the G6PD gene and its flanking regions.

resultsOverall, the prevalence of phenotypic G6PDd was 1.4% (22/1609). For the first time in the Ethiopian population, the African variant (A-) was detected in 3.5% (7/199) of the limited set of genotyped samples, which were all phenotypically normal. Interestingly, all of these individuals had a variation at the rs2515904 locus. Strong geographical variation was observed for both phenotypic and genotypic G6PDd; three-quarters of the phenotypically G6PDd individuals were detected in Gambela.

conclusionA very low prevalence of G6PDd was detected in the present study populations. The presence of the A- variant alongside other G6PD mutants and the patchy distribution of G6PDd indicate that larger studies specifically designed to unravel the distribution of G6PDd at small geographical scale may be needed to tailor malaria elimination efforts in Ethiopia to the local context.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultChildCross-Sectional StudiesEthiopiaFemaleGenotypeGlucosephosphate Dehydrogenase DeficiencyHumansMalePhenotypePrevalenceYoung Adult8-AminoquinolineG6PDHaemolysisP. vivaxRadical cure

Identifiers

PMID30071859
PMCPMC6071387
OpenAlexW2887531180

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.