Evidence map›Paper›PMID 30070634›Full record

ArticleeLife2018

Efficient support of virus-like particle assembly by the HIV-1 packaging signal.

Mauricio Comas-Garcia, Tomas Kroupa, Siddhartha Ak Datta, Demetria P Harvin, Wei-Shau Hu, Alan Rein

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 41 citations in OpenAlex.

  1. Mechanisms of HIV-1 assembly, release and maturation.Nature reviews. Microbiology · 2026
    Review
  2. Article
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  4. Article
  5. Article
  6. Article
  7. Tailored Viral-like Particles as Drivers of Medical Breakthroughs.International journal of molecular sciences · 2024
    Review
  8. Review
  9. Article
  10. The "basics" of HIV-1 assembly.PLoS pathogens · 2024
    Article
  11. Article
  12. Review
  13. Article
  14. Single-particle studies of the effects of RNA-protein interactions on the self-assembly of RNA virus particles.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Mauricio Comas-GarciaHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.ORCID http://orcid.org/0000-0002-7733-5138
Tomas KroupaHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.ORCID https://orcid.org/0000-0002-5996-9057
Siddhartha Ak DattaHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.
Demetria P HarvinHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.
Wei-Shau HuHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.
Alan ReinHIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, United States.ORCID http://orcid.org/0000-0002-8273-546X
National Cancer Institute · US

Funding

Understanding Retroviral Gag and RNA Targeting and Virus AssemblyZIABC010506 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HU, WEI-SHAU · 2009 to 2025
$12.1M
Retrovirus Assembly and MaturationZIABC010511 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI REIN, ALAN · 2009 to 2025
$9.4M
NIH HHS Intramural AIDS Targeted Antiviral Therapy Program
6 · The paper itself

Abstract

The principal structural component of a retrovirus particle is the Gag protein. Retroviral genomic RNAs contain a 'packaging signal' ('Ψ') and are packaged in virus particles with very high selectivity. However, if no genomic RNA is present, Gag assembles into particles containing cellular mRNA molecules. The mechanism by which genomic RNA is normally selected during virus assembly is not understood. We previously reported (<xref ref-type="bibr" rid="bib9">Comas-Garcia et al., 2017</xref>) that at physiological ionic strength, recombinant HIV-1 Gag binds with similar affinities to RNAs with or without Ψ, and proposed that genomic RNA is selectively packaged because binding to Ψ initiates particle assembly more efficiently than other RNAs. We now present data directly supporting this hypothesis. We also show that one or more short stretches of unpaired G residues are important elements of Ψ; Ψ may not be localized to a single structural element, but is probably distributed over >100 bases.

Indexed as

gag Gene Products, Human Immunodeficiency VirusHIV-1Nucleic Acid ConformationRNA, ViralVirionVirus Assemblygag Gene Products, Human Immunodeficiency VirusRNA, ViralHIVinfectious diseasemicrobiologymolecular biophysicsRNAstructural biologyvirusvirus assembly

Identifiers

PMID30070634
PMCPMC6092119
OpenAlexW2886498186

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.