Evidence map›Paper›PMID 30069598›Full record

ArticleMolecular genetics and genomics : MGG2018

SNP genotyping reveals major QTLs for plant architectural traits between A-genome peanut wild species.

Ratan Chopra, Charles E Simpson, Andrew Hillhouse, Paxton Payton, Jyotsna Sharma, Mark D Burow

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In one paragraph

Article in Molecular genetics and genomics : MGG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genome-Wide Analysis and Expression Profiles of AhCOLs Family in Peanut (International journal of molecular sciences · 2025
    Article
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ratan ChopraDepartment of Plant and Soil Sciences, Texas Tech University, Lubbock, TX, 79409, USA.
Charles E SimpsonTexas A&M AgriLife Research, Stephenville, TX, 76401, USA.
Andrew HillhouseDepartment of Molecular and Cellular Medicine, Texas A&M University, College Station, TX, 77843, USA.
Paxton PaytonUSDA-ARS-CSRL, Lubbock, TX, 79415, USA.
Jyotsna SharmaDepartment of Plant and Soil Sciences, Texas Tech University, Lubbock, TX, 79409, USA.
Mark D BurowDepartment of Plant and Soil Sciences, Texas Tech University, Lubbock, TX, 79409, USA. mburow@tamu.edu.ORCID http://orcid.org/0000-0003-3694-7397

Funding

National Peanut Board 332/TX-99/1139National Peanut Board 332/TX-99/1213NIFA Hatch TEX08835Ogallala Aquifer Program IPM_12.06Peanut and Mycotoxin Innovation Lab RC299-430/4942356Peanut Foundation 04-858-14
6 · The paper itself

Abstract

key messageQTL mapping of important architectural traits was successfully applied to an A-genome diploid population using gene-specific variations. Peanut wild species are an important source of resistance to biotic and possibly abiotic stress; because these species differ from the cultigen in many traits, we have undertaken to identify QTLs for several plant architecture-related traits. In this study, we took recently identified SNPs, converted them into markers, and identified QTLs for architectural traits. SNPs from RNASeq data distinguishing two parents, A. duranensis (KSSc38901) and A. cardenasii (GKP10017), of a mapping population were identified using three references-A. duranensis V14167 genome sequence, and transcriptome sequences of A. duranensis KSSc38901 and OLin. More than 49,000 SNPs differentiated the parents, and 87.9% of the 190 SNP calls tested were validated. SNPs were then genotyped on 91 F

Indexed as

Genome, PlantPolymorphism, Single NucleotideQuantitative Trait LociArachisChromosome MappingDomesticationEvolution, MolecularGenetic Association StudiesGenetic LinkageGenetic MarkersGenotypePhenotypeSpecies SpecificityGenetic MarkersArachisDomesticationFluidigmKASPMarkersPeanutQTLsSNPsWild species

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.