Evidence map›Paper›PMID 30068964›Full record

ArticleScientific reports2018

Evolution of high pathogenicity of H5 avian influenza virus: haemagglutinin cleavage site selection of reverse-genetics mutants during passage in chickens.

Jasmina M Luczo, Mary Tachedjian, Jennifer A Harper, Jean S Payne, Jeffrey M Butler, Sandra I Sapats, Suzanne L Lowther, Wojtek P Michalski, John Stambas, John Bingham

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Jasmina M LuczoAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Mary TachedjianAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.ORCID 0000-0002-8936-6564
Jennifer A HarperAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Jean S PayneAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Jeffrey M ButlerAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Sandra I SapatsAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Suzanne L LowtherAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
Wojtek P MichalskiAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia.
John StambasSchool of Medicine, Deakin University, Geelong, Victoria, Australia.
John BinghamAustralian Animal Health Laboratory (AAHL), Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, Victoria, Australia. John.Bingham@csiro.au.ORCID 0000-0003-2360-3827
Commonwealth Scientific and Industrial Research Organisation · AUDeakin University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low pathogenicity avian influenza viruses (LPAIVs) are generally asymptomatic in their natural avian hosts. LPAIVs can evolve into highly pathogenic forms, which can affect avian and human populations with devastating consequences. The switch to highly pathogenic avian influenza virus (HPAIV) from LPAIV precursors requires the acquisition of multiple basic amino acids in the haemagglutinin cleavage site (HACS) motif. Through reverse genetics of an H5N1 HPAIV, and experimental infection of chickens, we determined that viruses containing five or more basic amino acids in the HACS motif were preferentially selected over those with three to four basic amino acids, leading to rapid replacement with virus types containing extended HACS motifs. Conversely, viruses harbouring low pathogenicity motifs containing two basic amino acids did not readily evolve to extended forms, suggesting that a single insertion of a basic amino acid into the cleavage site motif of low-pathogenic viruses may lead to escalating selection for extended motifs. Our results may explain why mid-length forms are rarely detected in nature. The stability of the short motif suggests that pathogenicity switching may require specific conditions of intense selection pressure (such as with high host density) to boost selection of the initial mid-length HACS forms.

Indexed as

AnimalsChickensHemagglutinin Glycoproteins, Influenza VirusInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsMutant ProteinsPoultry DiseasesProteolysisReverse GeneticsSelection, Genetichemagglutinin, avian influenza A virusHemagglutinin Glycoproteins, Influenza VirusMutant Proteins

Identifiers

PMID30068964
PMCPMC6070550
OpenAlexW2883345615

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.