Evidence map›Paper›PMID 30068653›Full record

ArticleJournal of virology2018

HIV-1 Employs Multiple Mechanisms To Resist Cas9/Single Guide RNA Targeting the Viral Primer Binding Site.

Zhen Wang, Wenzhou Wang, Ya Cheng Cui, Qinghua Pan, Weijun Zhu, Patrick Gendron, Fei Guo, Shan Cen, Michael Witcher, Chen Liang

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. CRISPR/Cas-New Molecular Scissors in Diagnostics and Therapeutics of COVID-19.Indian journal of clinical biochemistry : IJCB · 2021
    Review
  11. HIV-1 cure strategies: why CRISPR?Expert opinion on biological therapy · 2021
    Review
  12. Review
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. MultiplexedViruses · 2020
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Zhen WangLady Davis Institute, Jewish General Hospital, Montreal, Canada.
Wenzhou WangLady Davis Institute, Jewish General Hospital, Montreal, Canada.
Ya Cheng CuiDepartment of Medicine, McGill University, Montreal, Canada.
Qinghua PanLady Davis Institute, Jewish General Hospital, Montreal, Canada.
Weijun ZhuInstitute of Pathogen Biology, Chinese Academy of Medical Science, Beijing, China.
Patrick GendronInstitute for Research in Immunology and Cancer, University of Montreal, Montreal, Canada.
Fei GuoInstitute of Pathogen Biology, Chinese Academy of Medical Science, Beijing, China.
Shan CenInstitute of Medicinal Biotechnology, Chinese Academy of Medical Science, Beijing, China.
Michael WitcherLady Davis Institute, Jewish General Hospital, Montreal, Canada.
Chen LiangLady Davis Institute, Jewish General Hospital, Montreal, Canada chen.liang@mcgill.ca.
McGill University · CAChinese Academy of Medical Sciences & Peking Union Medical College · CNInstitute for Research in Immunology and Cancer · CAJewish General Hospital · CA

Funding

CIHR IBC150405
6 · The paper itself

Abstract

The clustered regularly interspaced short palindromic repeat (CRISPR)-CRISPR-associated protein 9 (Cas9) gene-editing technology has been used to inactivate viral DNA as a new strategy to eliminate chronic viral infections, including HIV-1. This utility of CRISPR-Cas9 is challenged by the high heterogeneity of HIV-1 sequences, which requires the design of the single guide RNA (sgRNA; utilized by the CRISPR-Cas9 system to recognize the target DNA) to match a specific HIV-1 strain in an HIV patient. One solution to this challenge is to target the viral primer binding site (PBS), which HIV-1 copies from cellular tRNA

Indexed as

Gene EditingCell LineCRISPR-Associated Protein 9DNA, ViralHIV-1HumansMutagenesis, InsertionalRNA, Guide, CRISPR-Cas SystemsSequence DeletionCRISPR-Associated Protein 9DNA, ViralRNA, Guide, CRISPR-Cas SystemsCRISPR-Cas9human immunodeficiency virusprimer binding site

Identifiers

PMID30068653
PMCPMC6158435
OpenAlexW2885552279

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.