Evidence map›Paper›PMID 30068289›Full record

ArticleBMC genomics2018

Genome-wide identification and characterization of the 14-3-3 family in Vitis vinifera L. during berry development and cold- and heat-stress response.

Cheng Cheng, Yi Wang, Fengmei Chai, Shaohua Li, Haiping Xin, Zhenchang Liang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
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  6. Identification and characterization of theFrontiers in plant science · 2024
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  8. The apple 14-3-3 geneFrontiers in plant science · 2023
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  10. Genome-wide analysis ofFrontiers in plant science · 2023
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  14. Article
  15. Article
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  18. Genome-Wide Investigation of theInternational journal of molecular sciences · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Cheng ChengKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, People's Republic of China.
Yi WangBeijing Key Laboratory of Grape Sciences and Enology, Laboratory of Plant Resources, Institute of Botany, the Chinese Academy of Sciences, Beijing, People's Republic of China.
Fengmei ChaiUniversity of Chinese Academy of Sciences, Beijing, People's Republic of China.
Shaohua LiBeijing Key Laboratory of Grape Sciences and Enology, Laboratory of Plant Resources, Institute of Botany, the Chinese Academy of Sciences, Beijing, People's Republic of China.
Haiping XinKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan, People's Republic of China. xinhaiping215@hotmail.com.
Zhenchang LiangBeijing Key Laboratory of Grape Sciences and Enology, Laboratory of Plant Resources, Institute of Botany, the Chinese Academy of Sciences, Beijing, People's Republic of China. ZL249@ibcas.ac.cn.
Chinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CNInstitute of Botany · CN

Funding

Agricultural Breeding Project of Ningxia Hui Autonomous Region NXNYYZ20150203National Natural Science Foundation of China 31572090National Natural Science Foundation of China 31772266
6 · The paper itself

Abstract

backgroundThe 14-3-3 family of ubiquitous proteins in eukaryotes plays important roles in the regulation of various plant biological processes. However, less information is known about this family in grape fruit.

resultsTo investigate the characteristics and functions of 14-3-3 in grape, a total of 11 14-3-3 proteins were identified. Phylogenetic analysis of 14-3-3 proteins in grape (VviGRFs) with homologous proteins in Arabidopsis showed that these proteins were classified into two groups, namely, epsilon and non-epsilon groups. Epsilon group members commonly contained more introns and motifs than non-epsilon group, and some intron positions were found to be conserved between Vitis and Arabidopsis 14-3-3 genes. RNA-seq and qRT-PCR results indicated that VviGRF genes may be involved in the regulation of grape development and berry ripening. Moreover, six VviGRFs exhibited significantly up- or down-regulated expression in response to cold and heat stresses, thereby revealing their potential roles in the regulation of abiotic stress responses.

conclusionsThis work provides fundamental knowledge for further studies about the biological roles of VviGRFs in grape development and abiotic stress response. The present result will also be beneficial for understanding their molecular mechanisms and improving grape agricultural traits in the future.

Indexed as

Stress, Physiological14-3-3 ProteinsCold TemperatureEvolution, MolecularFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenome, PlantHot TemperatureMultigene FamilyPhylogenyPlant ProteinsVitis14-3-3 ProteinsPlant Proteins14–3-3Abiotic stressBerryDevelopmentExpressionGrape

Identifiers

PMID30068289
PMCPMC6090852
OpenAlexW2885046830

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.