Evidence map›Paper›PMID 30067985›Full record

ArticleCell reports2018

PHD3 Regulates p53 Protein Stability by Hydroxylating Proline 359.

Javier Rodriguez, Ana Herrero, Shuijie Li, Nora Rauch, Andrea Quintanilla, Kieran Wynne, Aleksandar Krstic, Juan Carlos Acosta, Cormac Taylor, Susanne Schlisio and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 4 countries.

Javier RodriguezSystems Biology Ireland, University College Dublin, Dublin 4, Ireland; Cancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh EH4 2XR, UK.
Ana HerreroSystems Biology Ireland, University College Dublin, Dublin 4, Ireland.
Shuijie LiLudwig Institute for Cancer Research Ltd., SE-17177 Stockholm, Sweden; Department of Microbiology and Tumor and Cell Biology, Karolinska Institutet, SE-17177 Stockholm, Sweden.
Nora RauchSystems Biology Ireland, University College Dublin, Dublin 4, Ireland.
Andrea QuintanillaCancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh EH4 2XR, UK.
Kieran WynneConway Institute, University College Dublin, Dublin 4, Ireland.
Aleksandar KrsticSystems Biology Ireland, University College Dublin, Dublin 4, Ireland.
Juan Carlos AcostaCancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh EH4 2XR, UK.
Cormac TaylorConway Institute, University College Dublin, Dublin 4, Ireland.
Susanne SchlisioLudwig Institute for Cancer Research Ltd., SE-17177 Stockholm, Sweden; Department of Microbiology and Tumor and Cell Biology, Karolinska Institutet, SE-17177 Stockholm, Sweden.
Alex von KriegsheimSystems Biology Ireland, University College Dublin, Dublin 4, Ireland; Cancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh EH4 2XR, UK. Electronic address: alex.vonkriegsheim@igmm.ed.ac.uk.
University College Dublin · IEEdinburgh Cancer Research · GBLudwig Cancer Research · BE

Funding

Cancer Research UK 16243Wellcome Trust
6 · The paper itself

Abstract

Cellular p53 protein levels are regulated by a ubiquitination/de-ubiquitination cycle that can target the protein for proteasomal destruction. The ubiquitination reaction is catalyzed by a multitude of ligases, whereas the removal of ubiquitin chains is mediated by two deubiquitinating enzymes (DUBs), USP7 (HAUSP) and USP10. Here, we show that PHD3 hydroxylates p53 at proline 359, a residue that is in the p53-DUB binding domain. Hydroxylation of p53 upon proline 359 regulates its interaction with USP7 and USP10, and its inhibition decreases the association of p53 with USP7/USP10, increases p53 ubiquitination, and rapidly reduces p53 protein levels independently of mRNA expression. Our results show that p53 is a PHD3 substrate and that hydroxylation by PHD3 regulates p53 protein stability through modulation of ubiquitination.

Indexed as

UbiquitinationBinding SitesHEK293 CellsHumansHypoxia-Inducible Factor-Proline DioxygenasesProtein BindingProtein StabilityTumor Suppressor Protein p53Ubiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseEGLN3 protein, humanHypoxia-Inducible Factor-Proline DioxygenasesTP53 protein, humanTumor Suppressor Protein p53Ubiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseUSP10 protein, humanUSP7 protein, humanEglN3hydroxylaseshypoxiap53PHD3proteomicsUSP7

Identifiers

PMID30067985
PMCPMC6088137
OpenAlexW2886859416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.