Evidence map›Paper›PMID 30067748›Full record

ArticlePloS one2018

Identification and expression analysis of a microRNA cluster derived from pre-ribosomal RNA in Papaver somniferum L. and Papaver bracteatum L.

Farshad Davoodi Mastakani, Gabriel Pagheh, Sajad Rashidi Monfared, Masoud Shams-Bakhsh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. MicroRNAs in Medicinal Plants.International journal of molecular sciences · 2022
    Review
  4. Review
  5. Interpol review of controlled substances 2016-2019.Forensic science international. Synergy · 2020
    Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Farshad Davoodi MastakaniDepartment of Agricultural Biotechnology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.
Gabriel PaghehDepartment of Agricultural Biotechnology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.
Sajad Rashidi MonfaredDepartment of Agricultural Biotechnology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.ORCID 0000-0001-5380-1387
Masoud Shams-BakhshDepartment of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.
Tarbiat Modares University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Opium poppy (Papaver somniferum L.) is one of the ancient medical crops, which produces several important alkaloids such as morphine, noscapine, sanguinarine and codeine. MicroRNAs are endogenous non-coding RNAs that play important regulatory roles in plant diverse biological processes. Many plant miRNAs are encoded as single transcriptional units, in contrast to animal miRNAs, which are often clustered. Herein, using computational approaches, a total of 22 miRNA precursors were identified, which five of them were located as a clustered in pre-ribosomal RNA. Afterward, the transcript level of the precursor and the mature of clustered miRNAs in two species of the Papaveraceae family, i.e. P. somniferum L. and P. bracteatum L, were quantified by RT-PCR. With respect to obtained results, these clustered miRNAs were expressed differentially in different tissues of these species. Moreover, using target prediction and Gene Ontology (GO)-based on functional classification indicated that these miRNAs might play crucial roles in various biological processes as well as metabolic pathways. In this study, we discovered the clustered miRNA derived from pre-rRNA, which may shed some light on the importance of miRNAs in the plant kingdom.

Indexed as

Base SequenceComputational BiologyGene OntologyMetabolic Networks and PathwaysMicroRNAsPapaverPlant LeavesPlant RootsPlants, MedicinalReal-Time Polymerase Chain ReactionRNA PrecursorsRNA, RibosomalSequence AlignmentMicroRNAsRNA PrecursorsRNA, Ribosomal

Identifiers

PMID30067748
PMCPMC6070170
OpenAlexW2886132984

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.