Evidence map›Paper›PMID 30067028›Full record

ArticleThe journal of physical chemistry. B2018

Temperature-Induced Collapse of Elastin-like Peptides Studied by 2DIR Spectroscopy.

Oleg Selig, Ana V Cunha, Mark B van Eldijk, Jan C M van Hest, Thomas L C Jansen, Huib J Bakker, Yves L A Rezus

Open access · hybridAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Peptide-based coacervates in therapeutic applications.Frontiers in bioengineering and biotechnology · 2022
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Oleg SeligAMOLF , Science Park 104 , 1098 XG Amsterdam , The Netherlands.
Ana V CunhaZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.
Mark B van EldijkInstitute for Molecules and Materials , Radboud University Nijmegen , Heyendaalseweg 135 , 6525 AJ Nijmegen , The Netherlands.
Jan C M van HestDepartment of Chemical Engineering and Chemistry Kranenveld , Eindhoven University of Technology , Building 14 , 5600 MB Eindhoven , The Netherlands.ORCID 0000-0001-7973-2404
Thomas L C JansenZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.ORCID 0000-0001-6066-6080
Huib J BakkerFOM institute AMOLF , Science Park 104 , 1098 XG Amsterdam , The Netherlands.ORCID 0000-0003-1564-5314
Yves L A RezusAMOLF , Science Park 104 , 1098 XG Amsterdam , The Netherlands.
Institute for Atomic and Molecular Physics · NLUniversity of Groningen · NLEindhoven University of Technology · NLRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elastin-like peptides are hydrophobic biopolymers that exhibit a reversible coacervation transition when the temperature is raised above a critical point. Here, we use a combination of linear infrared spectroscopy, two-dimensional infrared spectroscopy, and molecular dynamics simulations to study the structural dynamics of two elastin-like peptides. Specifically, we investigate the effect of the solvent environment and temperature on the structural dynamics of a short (5-residue) elastin-like peptide and of a long (450-residue) elastin-like peptide. We identify two vibrational energy transfer processes that take place within the amide I' band of both peptides. We observe that the rate constant of one of the exchange processes is strongly dependent on the solvent environment and argue that the coacervation transition is accompanied by a desolvation of the peptide backbone where up to 75% of the water molecules are displaced. We also study the spectral diffusion dynamics of the valine(1) residue that is present in both peptides. We find that these dynamics are relatively slow and indicative of an amide group that is shielded from the solvent. We conclude that the coacervation transition of elastin-like peptides is probably not associated with a conformational change involving this residue.

Indexed as

AmidesHydrophobic and Hydrophilic InteractionsMolecular Dynamics SimulationPeptidesPhase TransitionProtein ConformationSpectrophotometry, InfraredTemperatureVibrationWaterAmidesPeptidesWater

Identifiers

PMID30067028
PMCPMC6143280
OpenAlexW2885068041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.