Evidence map›Paper›PMID 30066857›Full record

ArticleInternational journal of oncology2018

Establishment of three novel cell lines derived from African American patients with colorectal carcinoma: A unique tool for assessing racial health disparity.

Jenny Paredes, Ping Ji, Joseph F Lacomb, Kenneth R Shroyer, Laura A Martello, Jennie L Williams

Open access · hybridAbstract readComparative Study
In one paragraph

Article in International journal of oncology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. MicroRNAs and Cancer Racial Disparities.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jenny ParedesDepartment of Medicine, Division of Gastroenterology & Hepatology, SUNY Downstate Medical Center, Brooklyn, NY 11203, USA.
Ping JiDepartment of Family, Population and Preventive Medicine, Stony Brook University, Stony Brook, NY 11794, USA.
Joseph F LacombDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, USA.
Kenneth R ShroyerDepartment of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Laura A MartelloDepartment of Medicine, Division of Gastroenterology & Hepatology, SUNY Downstate Medical Center, Brooklyn, NY 11203, USA.
Jennie L WilliamsDepartment of Family, Population and Preventive Medicine, Stony Brook University, Stony Brook, NY 11794, USA.
Stony Brook University · USSUNY Downstate Health Sciences University · US

Funding

Phosphosulindac, miRNAs and cancer racial disparityR01CA140487 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI WILLIAMS, JENNIE L · 2010 to 2014
$1.6M
Training and Education ProgramP20CA192994 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI LI, ELLEN · 2015 to 2018
$1.6M
Training and Education ProgramP20CA192996 · NCI · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD · 2015 to 2018
$620k
NCI NIH HHS P20 CA192994NCI NIH HHS P20 CA192996NCI NIH HHS R01 CA140487
6 · The paper itself

Abstract

The incidence and mortality rates of colorectal carcinoma (CRC) are higher among African Americans (AAs) compared with Caucasian Americans (CAs). To assess the molecular properties associated with racial health disparity, three cell lines derived from colorectal tumors of three AA subjects were established. Cellular and molecular characterization of the cell lines designated CHTN06, SB501 and SB521 was performed using standard technologies, including immunofluorescence, electron microscopy, karyotyping, reverse transcription-polymerase chain reaction, ELISA and immunoblot analysis. The histology and morphology of CHTN06 xenografts were examined by hematoxylin and eosin staining. A total of three AA CRC cell lines derived from primary tumors were established and characterized. These cell lines were successfully cultured without immortalization and were found to be tumorigenic as mouse xenografts. In the present study, immunoblotting and immunofluorescence confirmed the expression of proteins known to be dysregulated in CRC, such as p53, DNA mismatch repair proteins and villin-1. Oncogenic miRNAs (i.e., miR-17, miR-21, miR-182, miR-210 and miR-222) were overexpressed in the AA CRC lines compared with the CA CRC lines (HT-29, HCT116 and SW480). Additionally, the AA CRC cell lines exhibited a differential inflammatory profile compared with HT-29 (CA CRC cell line); specifically noted was IL-8 secretion in response to inflammatory stimuli. In conclusion, three novel cell lines derived from AA CRC tissues were generated. These cell lines were characterized as epithelial in nature and exhibited differential expression of several miRNAs and inflammatory responses compared with commercially available cell lines of CA origin. The CRC cell lines CHTN06, SB501 and SB521 represent novel tools that may be used to provide diverse in vitro and in vivo models for studying CRC and racial health disparity.

Indexed as

Black or African AmericanHealth Status DisparitiesAgedAnimalsCell Line, TumorCell MovementCell ProliferationColonColorectal NeoplasmsEpithelial CellsFemaleGene Expression Regulation, NeoplasticHumansInterleukin-8KaryotypingMaleCXCL8 protein, humanInterleukin-8

Identifiers

PMID30066857
PMCPMC6086619
OpenAlexW2886728892

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.