Evidence map›Paper›PMID 30066306›Full record

ArticleMolecular neurobiology2019

Alternative Splicing of the Delta-Opioid Receptor Gene Suggests Existence of New Functional Isoforms.

Marjo Piltonen, Marc Parisien, Stéphanie Grégoire, Anne-Julie Chabot-Doré, Seyed Mehdi Jafarnejad, Pierre Bérubé, Haig Djambazian, Rob Sladek, Geneviève Geneau, Patrick Willett and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular neurobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Histamine HBiomolecules · 2024
    Review
  4. Article
  5. Review
  6. Review
  7. GPCRomics: An Approach to Discover GPCR Drug Targets.Trends in pharmacological sciences · 2019
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Marjo PiltonenFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada.ORCID http://orcid.org/0000-0002-7401-9105
Marc ParisienFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada.
Stéphanie GrégoireFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada.
Anne-Julie Chabot-DoréFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada.
Seyed Mehdi JafarnejadGoodman Cancer Research Centre and Department of Biochemistry, Faculty of Medicine, McGill University, Montreal, Quebec, H3A 1A3, Canada.
Pierre BérubéDepartments of Human Genetics and Medicine, Faculty of Medicine, McGill University, Montreal, Quebec, H3A 0G1, Canada.
Haig DjambazianDepartments of Human Genetics and Medicine, Faculty of Medicine, McGill University, Montreal, Quebec, H3A 0G1, Canada.
Rob SladekDepartments of Human Genetics and Medicine, Faculty of Medicine, McGill University, Montreal, Quebec, H3A 0G1, Canada.
Geneviève GeneauMcGill University and Génome Québec Innovation Centre, Montreal, Quebec, H3A 0G1, Canada.
Patrick WillettMcGill University and Génome Québec Innovation Centre, Montreal, Quebec, H3A 0G1, Canada.
Laura S StoneFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada.
Svetlana A ShabalinaNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Luda DiatchenkoFaculty of Dentistry, Montreal, Quebec, H3A 0G1, Canada. luda.diatchenko@mcgill.ca.
McGill University · CAMcGill University and Génome Québec Innovation Centre · CANational Institutes of Health · US

Funding

Canadian Institutes of Health Research G237818/CERC09/CIHR
6 · The paper itself

Abstract

The delta-opioid receptor (DOPr) participates in mediating the effects of opioid analgesics. However, no selective agonists have entered clinical care despite potential to ameliorate many neurological and psychiatric disorders. In an effort to address the drug development challenges, the functional contribution of receptor isoforms created by alternative splicing of the three-exonic coding gene, OPRD1, has been overlooked. We report that the gene is transcriptionally more diverse than previously demonstrated, producing novel protein isoforms in humans and mice. We provide support for the functional relevance of splice variants through context-dependent expression profiling (tissues, disease model) and conservation of the transcriptional landscape in closely related vertebrates. The conserved alternative transcriptional events have two distinct patterns. First, cassette exon inclusions between exons 1 and 2 interrupt the reading frame, producing truncated receptor fragments comprising only the first transmembrane (TM) domain, despite the lack of exact exon orthologues between distant species. Second, a novel promoter and transcriptional start site upstream of exon 2 produces a transcript of an N-terminally truncated 6TM isoform. However, a fundamental difference in the exonic landscaping as well as translation and translation products poses limits for modelling the human DOPr receptor system in mice.

Indexed as

Alternative SplicingAnimalsCell Line, TumorChronic PainConserved SequenceDisease Models, AnimalEvolution, MolecularFetusHumansMaleMice, Inbred C57BLProtein BiosynthesisProtein IsoformsReceptors, Opioid, deltaRibosomesRNA, MessengerProtein IsoformsReceptors, Opioid, deltaRNA, MessengerAlternative splicingDelta-opioid receptorGPCROPRD1Truncated receptor

Identifiers

PMID30066306
OpenAlexW2886886952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.