Evidence map›Paper›PMID 30065344›Full record

ArticleScientific reports2018

Positive selection and climatic effects on MHC class II gene diversity in hares (Lepus capensis) from a steep ecological gradient.

Asma Awadi, Hichem Ben Slimen, Steve Smith, Felix Knauer, Mohamed Makni, Franz Suchentrunk

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Coats of Variable Hue in Tunisian Hares (GenusAnimals : an open access journal from MDPI · 2026
    Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Asma AwadiUnité de Recherche Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique, Faculty of Sciences of Tunis, University of Tunis El Manar, 2092, Tunis, Tunisia. awadiasma@gmail.com.
Hichem Ben SlimenUnité de Recherche Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique, Faculty of Sciences of Tunis, University of Tunis El Manar, 2092, Tunis, Tunisia.
Steve SmithResearch Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Savoyenstrasse 1, 1160, Vienna, Austria.ORCID 0000-0002-1318-0018
Felix KnauerResearch Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Savoyenstrasse 1, 1160, Vienna, Austria.
Mohamed MakniUnité de Recherche Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique, Faculty of Sciences of Tunis, University of Tunis El Manar, 2092, Tunis, Tunisia.
Franz SuchentrunkResearch Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Savoyenstrasse 1, 1160, Vienna, Austria.
Tunis University · TNUniversity of Veterinary Medicine Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In natural populations, allelic diversity of the major histocompatibility complex (MHC) is commonly interpreted as resulting from positive selection in varying spatiotemporal pathogenic landscapes. Composite pathogenic landscape data are, however, rarely available. We studied the spatial distribution of allelic diversity at two MHC class II loci (DQA, DQB) in hares, Lepus capensis, along a steep ecological gradient in North Africa and tested the role of climatic parameters for the spatial distribution of DQA and DQB proteins. Climatic parameters were considered to reflect to some extent pathogenic landscape variation. We investigated historical and contemporary forces that have shaped the variability at both genes, and tested for differential selective pressure across the ecological gradient by comparing allelic variation at MHC and neutral loci. We found positive selection on both MHC loci and significantly decreasing diversity from North to South Tunisia. Our multinomial linear models revealed significant effects of geographical positions that were correlated with mean annual temperature and precipitation on the occurrence of protein variants, but no effects of co-occurring DQA or DQB proteins, respectively. Diversifying selection, recombination, adaptation to local pathogenic landscapes (supposedly reflected by climate parameters) and neutral demographic processes have shaped the observed MHC diversity and differentiation patterns.

Indexed as

Africa, NorthernAllelesAnimalsClimateEcologyEcosystemEvolution, MolecularGene FrequencyGenes, MHC Class IIGenetic VariationGeographyHaresMicrosatellite RepeatsPhylogenySelection, GeneticSequence Alignment

Identifiers

PMID30065344
PMCPMC6068193
OpenAlexW2884108862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.