Evidence map›Paper›PMID 30065301›Full record

ArticleScientific reports2018

Genotype determination of the OPN1LW/OPN1MW genes: novel disease-causing mechanisms in Japanese patients with blue cone monochromacy.

Satoshi Katagiri, Maki Iwasa, Takaaki Hayashi, Katsuhiro Hosono, Takahiro Yamashita, Kazuki Kuniyoshi, Shinji Ueno, Mineo Kondo, Hisao Ueyama, Hisakazu Ogita and 7 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Ocular genetics in the Japanese population.Japanese journal of ophthalmology · 2024
    Review
  4. Article
  5. Review
  6. Article
  7. The landscape of submicroscopic structural variants at theProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
  9. Article
  10. Next-Generation Sequencing Applications for Inherited Retinal Diseases.International journal of molecular sciences · 2021
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 1 country.

Satoshi KatagiriDepartment of Ophthalmology, The Jikei University School of Medicine, Tokyo, Japan.ORCID 0000-0001-7787-8194
Maki IwasaDepartment of Ophthalmology, Shiga University of Medical Science, Shiga, Japan.
Takaaki HayashiDepartment of Ophthalmology, The Jikei University School of Medicine, Tokyo, Japan. taka@jikei.ac.jp.
Katsuhiro HosonoDepartment of Ophthalmology, Hamamatsu University School of Medicine, Shizuoka, Japan.
Takahiro YamashitaDepartment of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan.
Kazuki KuniyoshiDepartment of Ophthalmology, Kindai University Faculty of Medicine, Osaka, Japan.
Shinji UenoDepartment of Ophthalmology, Nagoya University Graduate School of Medicine, Aichi, Japan.
Mineo KondoDepartment of Ophthalmology, Mie University Graduate School of Medicine, Mie, Japan.
Hisao UeyamaDepartment of Biochemistry and Molecular Biology, Shiga University of Medical Science, Shiga, Japan. datt@belle.shiga-med.ac.jp.
Hisakazu OgitaDepartment of Biochemistry and Molecular Biology, Shiga University of Medical Science, Shiga, Japan.
Yoshinori ShichidaDepartment of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan.
Hidehito InagakiDivision of Molecular Genetics, Institute for Comprehensive Medical Science, Fujita Health University, Aichi, Japan.
Hiroki KurahashiDivision of Molecular Genetics, Institute for Comprehensive Medical Science, Fujita Health University, Aichi, Japan.
Hiroyuki KondoDepartment of Ophthalmology, University of Occupational and Environmental Health, Fukuoka, Japan.ORCID 0000-0002-3194-152X
Masahito OhjiDepartment of Ophthalmology, Shiga University of Medical Science, Shiga, Japan.
Yoshihiro HottaDepartment of Ophthalmology, Hamamatsu University School of Medicine, Shizuoka, Japan.
Tadashi NakanoDepartment of Ophthalmology, The Jikei University School of Medicine, Tokyo, Japan.
Shiga University of Medical Science · JPJikei University School of Medicine · JPFujita Health University · JPHamamatsu University School of Medicine · JPKyoto University · JPKindai University · JPMie University · JPNagoya University · JPUniversity of Occupational and Environmental Health Japan · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blue cone monochromacy (BCM) is characterized by loss of function of both OPN1LW (the first) and OPN1MW (the downstream) genes on the X chromosome. The purpose of this study was to investigate the first and downstream genes in the OPN1LW/OPN1MW array in four unrelated Japanese males with BCM. In Case 1, only one gene was present. Abnormalities were found in the promoter, which had a mixed unique profile of first and downstream gene promoters and a -71A > C substitution. As the promoter was active in the reporter assay, the cause of BCM remains unclear. In Case 2, the same novel mutation, M273K, was present in exon 5 of both genes in a two-gene array. The mutant pigments showed no absorbance at any of the wavelengths tested, suggesting that the mutation causes pigment dysfunction. Case 3 had a large deletion including the locus control region and entire first gene. Case 4 also had a large deletion involving exons 2-6 of the first gene. As an intact LCR was present upstream and one apparently normal downstream gene was present, BCM in Case 4 was not ascribed solely to the deletion. The deletions in Cases 3 and 4 were considered to have been caused by non-homologous recombination.

Indexed as

AdultColor Vision DefectsExonsGenotypeHumansJapanMaleMutationPedigreePromoter Regions, GeneticRetinal Cone Photoreceptor CellsRod OpsinsSequence Deletionlong-wavelength opsinmiddle-wavelength opsinRod Opsins

Identifiers

PMID30065301
PMCPMC6068165
OpenAlexW2883773813

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.