Evidence map›Paper›PMID 30064337›Full record

ArticleRNA biology2018

Organ-wide profiling in mouse reveals high editing levels of Filamin B mRNA in the musculoskeletal system.

Philipp Czermak, Fabian Amman, Michael F Jantsch, Laura Cimatti

Open access · hybridAbstract read
In one paragraph

Article in RNA biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Trial
  2. Review
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  4. Divergent landscapes of A-to-I editing in postmortem and living human brain.medRxiv : the preprint server for health sciences · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Philipp Czermaka Center of Anatomy and Cell Biology, Division of Cell Biology , Medical University of Vienna , Vienna , Austria.ORCID 0000-0001-5825-0449
Fabian Ammanb Institute of Theoretical Biochemistry , University of Vienna , Vienna , Austria.ORCID 0000-0002-8646-859X
Michael F Jantscha Center of Anatomy and Cell Biology, Division of Cell Biology , Medical University of Vienna , Vienna , Austria.ORCID 0000-0003-1747-0853
Laura Cimattia Center of Anatomy and Cell Biology, Division of Cell Biology , Medical University of Vienna , Vienna , Austria.ORCID 0000-0002-5396-9603
Medical University of Vienna · ATUniversity of Vienna · AT

Funding

Austrian Science Fund FWF P 26845Austrian Science Fund FWF P 26882
6 · The paper itself

Abstract

Adenosine to inosine RNA editing in protein-coding messenger RNAs (mRNAs) potentially leads to changes in the amino acid composition of the encoded proteins. The mRNAs encoding the ubiquitously expressed actin-crosslinking proteins Filamin A and Filamin B undergo RNA editing leading to a highly conserved glutamine to arginine exchange at the identical position in either protein. Here, by targeted amplicon sequencing we analysed the RNA editing of Filamin B across several mouse tissues during post-natal development. We find highest filamin B editing levels in skeletal muscles, cartilage and bones, tissues where Filamin B function seems most important. Through the analysis of Filamin B editing in mice deficient in either ADAR1 or 2, we identified ADAR2 as the enzyme responsible for Filamin B RNA editing. We show that in neuronal tissues Filamin B editing drops in spliced transcripts indicating regulated maturation of edited transcripts. We show further that the variability of Filamin B editing across several organs correlates with its mRNA expression.

Indexed as

RNA EditingAdenosineAdenosine DeaminaseAnimalsBone and BonesCartilageFilaminsHumansInosineMaleMiceMice, Inbred C57BLMuscle, SkeletalNeuronsRNA-Binding ProteinsRNA, MessengerADAR1 protein, mouseADAR2 protein, mouseAdenosineAdenosine DeaminaseFilaminsFLNB protein, mouseInosineRNA-Binding ProteinsRNA, MessengerADARsAdenosine to inosine RNA editingamplicon sequencingFilamin Bmouse development

Identifiers

PMID30064337
PMCPMC6161736
OpenAlexW2886645590

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.